Uniprot ID | P31623 |
Uniprot Name | POL_JSRV |
Taxonomy ID | 11746 |
Sequence |
M
G
H
T
H
S
R
Q
L
F
V
H
M
L
S
V
M
L
K
H
R
G
I
T
V
S
K
T
K
L
I
N
F
L
S
F
I
E
E
V
C
P
W
F
P
R
E
G
T
V
N
L
E
T
W
K
K
V
G
E
Q
I
R
T
H
Y
T
L
H
G
P
E
K
V
P
V
E
T
L
S
F
W
T
L
I
R
D
C
L
D
F
D
N
D
E
L
K
R
L
G
N
L
L
K
Q
E
E
D
P
L
H
T
P
D
S
V
P
S
Y
D
P
P
P
P
P
P
P
S
L
K
M
H
P
S
D
N
D
D
S
L
S
S
T
D
E
A
E
L
D
E
E
A
A
K
Y
H
Q
E
D
W
G
F
L
A
Q
E
K
G
A
L
T
S
K
D
E
L
V
E
C
F
K
N
L
T
I
A
L
Q
N
A
G
I
Q
L
P
S
N
N
N
T
F
P
S
A
P
P
F
P
P
A
Y
T
P
T
V
M
A
G
L
D
P
P
P
G
F
P
P
P
S
K
H
M
S
P
L
Q
K
A
L
R
Q
A
Q
R
L
G
E
V
V
S
D
F
S
L
A
F
P
V
F
E
N
N
N
Q
R
Y
Y
E
S
L
P
F
K
Q
L
K
E
L
K
I
A
C
S
Q
Y
G
P
T
A
P
F
T
I
A
M
I
E
S
L
G
T
Q
A
L
P
P
N
D
W
K
Q
T
A
R
A
C
L
S
G
G
D
Y
L
L
W
K
S
E
F
F
E
Q
C
A
R
I
A
D
V
N
R
Q
Q
G
I
Q
T
S
Y
E
M
L
I
G
E
G
P
Y
Q
A
T
D
T
Q
L
N
F
L
P
G
A
Y
A
Q
I
S
N
A
A
R
Q
A
W
K
K
L
P
S
S
S
T
K
T
E
D
L
S
K
V
R
Q
G
P
D
E
P
Y
Q
D
F
V
A
R
L
L
D
T
I
G
K
I
M
S
D
E
K
A
G
M
V
L
A
K
Q
L
A
F
E
N
A
N
S
A
C
Q
A
A
L
R
P
Y
R
K
K
G
D
L
S
D
F
I
R
I
C
A
D
I
G
P
S
Y
M
Q
G
I
A
M
A
A
A
L
Q
G
K
S
I
K
E
V
L
F
Q
Q
Q
A
R
N
K
K
G
L
Q
K
S
G
N
S
G
C
F
V
C
G
Q
P
G
H
R
A
A
V
C
P
Q
K
H
Q
T
S
V
N
T
P
N
L
C
P
R
C
K
K
G
K
H
W
A
R
D
C
R
S
K
T
D
V
Q
G
N
P
L
P
P
V
S
G
N
L
G
E
G
P
A
P
G
P
E
T
M
L
W
G
N
T
A
G
S
K
R
T
I
A
D
L
C
R
A
T
R
G
S
A
G
L
D
L
C
A
T
S
Y
T
V
L
T
P
E
M
G
V
Q
T
L
A
T
G
V
F
G
P
L
P
P
G
T
V
G
L
L
L
G
R
S
S
A
S
L
K
G
I
L
I
H
P
G
V
I
D
S
D
Y
T
G
E
I
K
I
L
A
S
A
P
N
K
I
I
V
I
N
A
G
Q
R
I
A
Q
L
L
L
V
P
L
V
I
Q
G
K
T
I
N
R
D
R
Q
D
K
G
F
G
S
S
D
A
Y
W
V
Q
N
V
T
E
A
R
P
E
L
E
L
R
I
N
A
N
F
F
R
G
V
L
D
T
G
A
D
I
S
V
I
S
D
K
Y
W
P
T
T
W
P
K
Q
M
A
I
S
T
L
Q
G
I
G
Q
T
T
N
P
E
Q
S
S
S
L
L
T
W
K
D
K
D
G
H
T
G
Q
F
K
P
Y
I
L
P
Y
L
P
V
N
L
W
G
R
D
I
L
S
K
M
G
V
Y
L
Y
S
P
S
P
T
V
T
D
L
M
L
D
Q
G
L
L
P
N
Q
G
L
G
K
Q
H
Q
G
I
I
L
P
L
D
L
K
P
N
Q
D
R
K
G
L
G
C
F
P
L
G
T
S
D
S
P
V
T
H
A
D
P
I
D
W
K
S
E
E
P
V
W
V
D
Q
W
P
L
T
Q
E
K
L
S
A
A
Q
Q
L
V
Q
E
Q
L
R
L
G
H
I
E
P
S
T
S
A
W
N
S
P
I
F
V
I
K
K
K
S
G
K
W
R
L
L
Q
D
L
R
K
V
N
E
T
M
M
H
M
G
A
L
Q
P
G
L
P
T
P
S
A
I
P
D
K
S
Y
I
I
V
I
D
L
K
D
C
F
Y
T
I
P
L
A
P
Q
D
C
K
R
F
A
F
S
L
P
S
V
N
F
K
E
P
M
Q
R
Y
Q
W
R
V
L
P
Q
G
M
T
N
S
P
T
L
C
Q
K
F
V
A
T
A
I
A
P
V
R
Q
R
F
P
Q
L
Y
L
V
H
Y
M
D
D
I
L
L
A
H
T
D
E
H
L
L
Y
Q
A
F
S
I
L
K
Q
H
L
S
L
N
G
L
V
I
A
D
E
K
I
Q
T
H
F
P
Y
N
Y
L
G
F
S
L
Y
P
R
V
Y
N
T
Q
L
V
K
L
Q
T
D
H
L
K
T
L
N
D
F
Q
K
L
L
G
D
I
N
W
I
R
P
Y
L
K
L
P
T
Y
T
L
Q
P
L
F
D
I
L
K
G
D
S
D
P
A
S
P
R
T
L
S
L
E
G
R
T
A
L
Q
S
I
E
E
A
I
R
Q
Q
Q
I
T
Y
C
D
Y
Q
R
S
W
G
L
Y
I
L
P
T
P
R
A
P
T
G
V
L
Y
Q
D
K
P
L
R
W
I
Y
L
S
A
T
P
T
K
H
L
L
P
Y
Y
E
L
V
A
K
I
I
A
K
G
R
H
E
A
I
Q
Y
F
G
M
E
P
P
F
I
C
V
P
Y
A
L
E
Q
Q
D
W
L
F
Q
F
S
D
N
W
S
I
A
F
A
N
Y
P
G
Q
I
T
H
H
Y
P
S
D
K
L
L
Q
F
A
S
S
H
A
F
I
F
P
K
I
V
R
R
Q
P
I
P
E
A
T
L
I
F
T
D
G
S
S
N
G
T
A
A
L
I
I
N
H
Q
T
Y
Y
A
Q
T
S
F
S
S
A
Q
V
V
E
L
F
A
V
H
Q
A
L
L
T
V
P
T
S
F
N
L
F
T
D
S
S
Y
V
V
G
A
L
Q
M
I
E
T
V
P
I
I
G
T
T
S
P
E
V
L
N
L
F
T
L
I
Q
Q
V
L
H
C
R
Q
H
P
C
F
F
G
H
I
R
A
H
S
T
L
P
G
A
L
V
Q
G
N
H
T
A
D
V
L
T
K
Q
V
F
F
Q
S
A
I
D
A
A
R
K
S
H
D
L
H
H
Q
N
S
H
S
L
R
L
Q
F
K
I
S
R
E
A
A
R
Q
I
V
K
S
C
S
T
C
P
Q
F
F
V
L
P
Q
Y
G
V
N
P
R
G
L
R
P
N
H
L
W
Q
T
D
V
T
H
I
P
Q
F
G
R
L
K
Y
V
H
V
S
I
D
T
F
S
N
F
L
M
A
S
L
H
T
G
E
S
T
R
H
C
I
Q
H
L
L
F
C
F
S
T
S
G
I
P
Q
T
L
K
T
D
N
G
P
G
Y
T
S
R
S
F
Q
R
F
C
L
S
F
Q
I
H
H
K
T
G
I
P
Y
N
P
Q
G
Q
G
I
V
E
R
A
H
Q
R
I
K
H
Q
L
L
K
Q
K
K
G
N
E
L
Y
S
P
S
P
H
N
A
L
N
H
A
L
Y
V
L
N
F
L
T
L
D
T
E
G
N
S
A
A
Q
R
F
W
G
E
R
S
S
C
K
K
P
L
V
R
W
K
D
P
L
T
N
L
W
Y
G
P
D
P
V
L
I
W
G
R
G
H
V
C
V
F
P
Q
D
A
E
A
P
R
W
I
P
E
R
L
V
R
A
A
E
E
L
P
D
A
S
D
A
T
H
D
P
E
|
Cofactor |
COFACTOR: Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000255|PROSITE-ProRule:PRU00405}; Note=The RT polymerase active site binds 2 magnesium ions. {ECO:0000255|PROSITE-ProRule:PRU00405}; |
Active site |
ACT_SITE 739 739 Protease; shared with dimeric partner. {ECO:0000255|PROSITE-ProRule:PRU00275}. |
Pfam |
PF00692
PF01585
PF02337
PF00607
PF00552
PF02022
PF00075
PF00665
PF00077
PF00078
PF06817
PF00098
|
InterPro |
IPR001969
IPR003322
IPR038124
IPR029054
IPR036157
IPR033704
IPR000467
IPR000721
IPR017856
IPR036862
IPR001037
IPR001584
IPR003308
IPR001995
IPR021109
IPR034170
IPR018061
IPR008916
IPR008919
IPR010999
IPR012337
IPR002156
IPR036397
IPR000477
IPR010661
IPR001878
IPR036875
|