Uniprot ID	Q87040
Uniprot Name	POL_SFVCP
Taxonomy ID	298339
Sequence	M N P L Q L L Q P L P A E V K G T K L L A H W D S G A T I T C I P E S F L E D E Q P I K Q T L I K T I H G E K Q Q N V Y Y L T F K V K G R K V E A E V I A S P Y E Y I L L S P T D V P W L T Q Q P L Q L T I L V P L Q E Y Q D R I L N K T A L P E E Q K Q Q L K A L F T K Y D N L W Q H W E N Q V G H R K I R P H N I A T G D Y P P R P Q K Q Y P I N P K A K P S I Q I V I D D L L K Q G V L T P Q N S T M N T P V Y P V P K P D G R W R M V L D Y R E V N K T I P L T A A Q N Q H S A G I L A T I V R Q K Y K T T L D L A N G F W A H P I T P D S Y W L T A F T W Q G K Q Y C W T R L P Q G F L N S P A L F T A D A V D L L K E V P N V Q V Y V D D I Y L S H D N P H E H I Q Q L E K V F Q I L L Q A G Y V V S L K K S E I G Q R T V E F L G F N I T K E G R G L T D T F K T K L L N V T P P K D L K Q L Q S I L G L L N F A R N F I P N F A E L V Q T L Y N L I A S S K G K Y I E W T E D N T K Q L N K V I E A L N T A S N L E E R L P D Q R L V I K V N T S P S A G Y V R Y Y N E S G K K P I M Y L N Y V F S K A E L K F S M L E K L L T T M H K A L I K A M D L A M G Q E I L V Y S P I V S M T K I Q K T P L P E R K A L P I R W I T W M T Y L E D P R I Q F H Y D K T L P E L K H I P D V Y T S S I P P L K H P S Q Y E G V F C T D G S A I K S P D P T K S N N A G M G I V H A I Y N P E Y K I L N Q W S I P L G H H T A Q M A E I A A V E F A C K K A L K V P G P V L V I T D S F Y V A E S A N K E L P Y W K S N G F V N N K K E P L K H I S K W K S I A E C L S I K P D I T I Q H E K G H Q P I N T S I H T E G N A L A D K L A T Q G S Y V V N C N T K K P N L D A E L D Q L L Q G N N V K G Y P K Q Y T Y Y L E D G K V K V S R P E G V K I I P P Q S D R Q K I V L Q A H N L A H T G R E A T L L K I A N L Y W W P N M R K D V V K Q L G R C K Q C L I T N A S N K T S G P I L R P D R P Q K P F D K F F I D Y I G P L P P S Q G Y L Y V L V I V D G M T G F T W L Y P T K A P S T S A T V K S L N V L T S I A I P K V I H S D Q G A A F T S S T F A E W A K E R G I H L E F S T P Y H P Q S S G K V E R K N S D I K R L L T K L L V G R P T K W Y D L L P V V Q L A L N N T Y S P V L K Y T P H Q L L F G I D S N T P F A N Q D T L D L T R E E E L S L L Q E I R A S L Y Q P S T P P A S S R S W S P V V G Q L V Q E R V A R P A S L R P R W H K P S T V L E V L N P R T V V I L D H L G N N R T V S I D N L K P T S H Q N G T T N D T A T M D H L E Q N E Q S S
Cofactor	COFACTOR: Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250}; Note=Binds 2 magnesium ions for reverse transcriptase polymerase activity. {ECO:0000250}; COFACTOR: Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250}; Note=Binds 2 magnesium ions for ribonuclease H (RNase H) activity. Substrate-binding is a precondition for magnesium binding. {ECO:0000250}; COFACTOR: Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250}; Note=Magnesium ions are required for integrase activity. Binds at least 1, maybe 2 magnesium ions. {ECO:0000250};
Active site	ACT_SITE 24 24 For protease activity. {ECO:0000255|PROSITE-ProRule:PRU00863}.
Pfam	PF17921 PF00075 PF17919 PF00665 PF00078 PF18103 PF03539
InterPro	IPR001584 IPR041588 IPR021109 IPR012337 IPR002156 IPR036397 IPR000477 IPR041577 IPR040903 IPR001641