Basic Info

Common NameL-Rhamnopyranose(F00391)
2D Structure
FRCD IDF00391
CAS Number
PubChem CID25310
FormulaC6H12O5
IUPAC Name

(3R,4R,5R,6S)-6-methyloxane-2,3,4,5-tetrol

InChI Key

SHZGCJCMOBCMKK-JFNONXLTSA-N

InChI

InChI=1S/C6H12O5/c1-2-3(7)4(8)5(9)6(10)11-2/h2-10H,1H3/t2-,3-,4+,5+,6?/m0/s1

Canonical SMILES

CC1C(C(C(C(O1)O)O)O)O

Isomeric SMILES

C[C@H]1[C@@H]([C@H]([C@H](C(O1)O)O)O)O

Synonyms
        
            L-Rhamnose
        
            Rhamnose
        
            L-Rhamnopyranose
        
            6-Deoxy-L-Mannopyranose
        
            6-Deoxy-L-Mannose
        
            L-(+)-RHAMNOSE
        
            L-Rha
        
            Rhamnopyranose
        
            6-Deoxy-Mannose
        
            CHEBI:62346
        
Classifies
                

                  
                    Predicted: Animal Toxin
                  

                
        
Update DateNov 13, 2018 16:48

Chemical Taxonomy

KingdomOrganic compounds
SuperclassOrganic oxygen compounds
ClassOrganooxygen compounds
SubclassCarbohydrates and carbohydrate conjugates
Intermediate Tree NodesMonosaccharides
Direct ParentHexoses
Alternative Parents
Molecular FrameworkAliphatic heteromonocyclic compounds
SubstituentsHexose monosaccharide - Oxane - Secondary alcohol - Hemiacetal - Oxacycle - Organoheterocyclic compound - Polyol - Hydrocarbon derivative - Alcohol - Aliphatic heteromonocyclic compound
DescriptionThis compound belongs to the class of organic compounds known as hexoses. These are monosaccharides in which the sugar unit is a is a six-carbon containing moeity.

Properties

Property NameProperty Value
Molecular Weight164.157
Hydrogen Bond Donor Count4
Hydrogen Bond Acceptor Count5
Rotatable Bond Count0
Complexity139
Monoisotopic Mass164.068
Exact Mass164.068
XLogP-2.1
Formal Charge0
Heavy Atom Count11
Defined Atom Stereocenter Count4
Undefined Atom Stereocenter Count1
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count0
Isotope Atom Count0
Covalently-Bonded Unit Count1

ADMET

Model Result Probability
Absorption
Blood-Brain BarrierBBB+0.5140
Human Intestinal AbsorptionHIA-0.5618
Caco-2 PermeabilityCaco2-0.6509
P-glycoprotein SubstrateNon-substrate0.6253
P-glycoprotein InhibitorNon-inhibitor0.9560
Non-inhibitor0.9917
Renal Organic Cation TransporterNon-inhibitor0.9389
Distribution
Subcellular localizationMitochondria0.6188
Metabolism
CYP450 2C9 SubstrateNon-substrate0.8017
CYP450 2D6 SubstrateNon-substrate0.8870
CYP450 3A4 SubstrateNon-substrate0.7106
CYP450 1A2 InhibitorNon-inhibitor0.9489
CYP450 2C9 InhibitorNon-inhibitor0.9723
CYP450 2D6 InhibitorNon-inhibitor0.9736
CYP450 2C19 InhibitorNon-inhibitor0.9775
CYP450 3A4 InhibitorNon-inhibitor0.9227
CYP Inhibitory PromiscuityLow CYP Inhibitory Promiscuity0.9502
Excretion
Toxicity
Human Ether-a-go-go-Related Gene InhibitionWeak inhibitor0.9649
Non-inhibitor0.9726
AMES ToxicityNon AMES toxic0.8645
CarcinogensNon-carcinogens0.9321
Fish ToxicityLow FHMT0.8979
Tetrahymena Pyriformis ToxicityLow TPT0.8033
Honey Bee ToxicityHigh HBT0.6938
BiodegradationReady biodegradable0.6280
Acute Oral ToxicityIII0.5590
Carcinogenicity (Three-class)Non-required0.6951

Model Value Unit
Absorption
Aqueous solubility-0.0392LogS
Caco-2 Permeability-0.1358LogPapp, cm/s
Distribution
Metabolism
Excretion
Toxicity
Rat Acute Toxicity1.4658LD50, mol/kg
Fish Toxicity2.5783pLC50, mg/L
Tetrahymena Pyriformis Toxicity-1.1746pIGC50, ug/L

References

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C-source metabolic profilings of foodborne Shiga-toxin producing E. coli match serogroup differentiations and highlight functional adaptations.Int J Food Microbiol2018 Feb 229217302
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