Gamma-Butyrolactone
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Basic Info
Common Name | Gamma-Butyrolactone(F04716) |
2D Structure | |
Description | One of the furans with a carbonyl thereby forming a cyclic lactone. It is an endogenous compound made from gamma-aminobutyrate and is the precursor of gamma-hydroxybutyrate. It is also used as a pharmacological agent and solvent. |
FRCD ID | F04716 |
CAS Number | 96-48-0 |
PubChem CID | 7302 |
Formula | C4H6O2 |
IUPAC Name | oxolan-2-one |
InChI Key | YEJRWHAVMIAJKC-UHFFFAOYSA-N |
InChI | InChI=1S/C4H6O2/c5-4-2-1-3-6-4/h1-3H2 |
Canonical SMILES | C1CC(=O)OC1 |
Isomeric SMILES | C1CC(=O)OC1 |
Wikipedia | Gamma-Butyrolactone |
Synonyms | gamma-Butyrolactone 96-48-0 4-Butyrolactone dihydrofuran-2(3H)-one BUTYROLACTONE 4-Butanolide 1,4-Butanolide 2-Oxolanone 4-Hydroxybutyric acid lactone 4-Deoxytetronic acid |
Classifies | Predicted: Animal Toxin |
Update Date | Nov 13, 2018 17:07 |
Chemical Taxonomy
Kingdom | Organic compounds |
Superclass | Organoheterocyclic compounds |
Class | Lactones |
Subclass | Gamma butyrolactones |
Intermediate Tree Nodes | Not available |
Direct Parent | Gamma butyrolactones |
Alternative Parents | |
Molecular Framework | Aliphatic heteromonocyclic compounds |
Substituents | Gamma butyrolactone - Tetrahydrofuran - Carboxylic acid ester - Oxacycle - Monocarboxylic acid or derivatives - Carboxylic acid derivative - Organic oxygen compound - Organic oxide - Hydrocarbon derivative - Organooxygen compound - Carbonyl group - Aliphatic heteromonocyclic compound |
Description | This compound belongs to the class of organic compounds known as gamma butyrolactones. These are compounds containing a gamma butyrolactone moiety, which consists of an aliphatic five-member ring with four carbon atoms, one oxygen atom, and bears a ketone group on the carbon adjacent to the oxygen atom. |
Properties
Property Name | Property Value |
---|---|
Molecular Weight | 86.09 |
Hydrogen Bond Donor Count | 0 |
Hydrogen Bond Acceptor Count | 2 |
Rotatable Bond Count | 0 |
Complexity | 67.9 |
Monoisotopic Mass | 86.037 |
Exact Mass | 86.037 |
XLogP | -0.6 |
Formal Charge | 0 |
Heavy Atom Count | 6 |
Defined Atom Stereocenter Count | 0 |
Undefined Atom Stereocenter Count | 0 |
Defined Bond Stereocenter Count | 0 |
Undefined Bond Stereocenter Count | 0 |
Isotope Atom Count | 0 |
Covalently-Bonded Unit Count | 1 |
ADMET
Model | Result | Probability |
---|---|---|
Absorption | ||
Blood-Brain Barrier | BBB+ | 0.9837 |
Human Intestinal Absorption | HIA+ | 0.9894 |
Caco-2 Permeability | Caco2+ | 0.6346 |
P-glycoprotein Substrate | Non-substrate | 0.8319 |
P-glycoprotein Inhibitor | Non-inhibitor | 0.9572 |
Non-inhibitor | 0.9896 | |
Renal Organic Cation Transporter | Non-inhibitor | 0.8004 |
Distribution | ||
Subcellular localization | Mitochondria | 0.6416 |
Metabolism | ||
CYP450 2C9 Substrate | Non-substrate | 0.8264 |
CYP450 2D6 Substrate | Non-substrate | 0.8742 |
CYP450 3A4 Substrate | Non-substrate | 0.7067 |
CYP450 1A2 Inhibitor | Non-inhibitor | 0.8028 |
CYP450 2C9 Inhibitor | Non-inhibitor | 0.8599 |
CYP450 2D6 Inhibitor | Non-inhibitor | 0.9398 |
CYP450 2C19 Inhibitor | Non-inhibitor | 0.8187 |
CYP450 3A4 Inhibitor | Non-inhibitor | 0.9841 |
CYP Inhibitory Promiscuity | Low CYP Inhibitory Promiscuity | 0.9591 |
Excretion | ||
Toxicity | ||
Human Ether-a-go-go-Related Gene Inhibition | Weak inhibitor | 0.9180 |
Non-inhibitor | 0.9700 | |
AMES Toxicity | Non AMES toxic | 0.9480 |
Carcinogens | Non-carcinogens | 0.9049 |
Fish Toxicity | Low FHMT | 0.8394 |
Tetrahymena Pyriformis Toxicity | Low TPT | 0.8364 |
Honey Bee Toxicity | High HBT | 0.7581 |
Biodegradation | Ready biodegradable | 0.9342 |
Acute Oral Toxicity | III | 0.8098 |
Carcinogenicity (Three-class) | Non-required | 0.6946 |
Model | Value | Unit |
---|---|---|
Absorption | ||
Aqueous solubility | 1.0072 | LogS |
Caco-2 Permeability | 1.6053 | LogPapp, cm/s |
Distribution | ||
Metabolism | ||
Excretion | ||
Toxicity | ||
Rat Acute Toxicity | 1.7154 | LD50, mol/kg |
Fish Toxicity | 2.5087 | pLC50, mg/L |
Tetrahymena Pyriformis Toxicity | -1.5950 | pIGC50, ug/L |
References
Title | Journal | Date | Pubmed ID |
---|---|---|---|
Streptogramins - two are better than one! | Int J Med Microbiol | 2014 Jan | 24119565 |
In vivo functions of the gamma-butyrolactone autoregulator receptor inStreptomyces ambofaciens producing spiramycin. | Biotechnol Lett | 2008 May | 18058070 |
Inverse gas chromatographic evaluation of the influence of soy protein on thebinding of selected butter flavor compounds in a wheat soda cracker system. | J Agric Food Chem | 2006 Jul 26 | 16848540 |
Cloning and in vivo functional analysis by disruption of a gene encoding thegamma-butyrolactone autoregulator receptor from Streptomyces natalensis. | Arch Microbiol | 2005 Dec | 16228193 |
The role of GABAB receptors in the discriminative stimulus effects of gamma-hydroxybutyrate in rats: time course and antagonism studies. | J Pharmacol Exp Ther | 2003 May | 12606639 |
Adverse events, including death, associated with the use of 1,4-butanediol. | N Engl J Med | 2001 Jan 11 | 11150358 |
Volatile compounds produced from monosodium glutamate in common food cooking. | J Agric Food Chem | 2000 Jun | 10888564 |
Targets
- General Function:
- Zinc ion binding
- Specific Function:
- Nuclear receptor that binds DNA as a monomer to ROR response elements (RORE) containing a single core motif half-site 5'-AGGTCA-3' preceded by a short A-T-rich sequence. Key regulator of cellular differentiation, immunity, peripheral circadian rhythm as well as lipid, steroid, xenobiotics and glucose metabolism. Considered to have intrinsic transcriptional activity, have some natural ligands like oxysterols that act as agonists (25-hydroxycholesterol) or inverse agonists (7-oxygenated sterols), enhancing or repressing the transcriptional activity, respectively. Recruits distinct combinations of cofactors to target gene regulatory regions to modulate their transcriptional expression, depending on the tissue, time and promoter contexts. Regulates the circadian expression of clock genes such as CRY1, ARNTL/BMAL1 and NR1D1 in peripheral tissues and in a tissue-selective manner. Competes with NR1D1 for binding to their shared DNA response element on some clock genes such as ARNTL/BMAL1, CRY1 and NR1D1 itself, resulting in NR1D1-mediated repression or RORC-mediated activation of the expression, leading to the circadian pattern of clock genes expression. Therefore influences the period length and stability of the clock. Involved in the regulation of the rhythmic expression of genes involved in glucose and lipid metabolism, including PLIN2 and AVPR1A. Negative regulator of adipocyte differentiation through the regulation of early phase genes expression, such as MMP3. Controls adipogenesis as well as adipocyte size and modulates insulin sensitivity in obesity. In liver, has specific and redundant functions with RORA as positive or negative modulator of expression of genes encoding phase I and Phase II proteins involved in the metabolism of lipids, steroids and xenobiotics, such as SULT1E1. Also plays also a role in the regulation of hepatocyte glucose metabolism through the regulation of G6PC and PCK1. Regulates the rhythmic expression of PROX1 and promotes its nuclear localization (By similarity). Plays an indispensable role in the induction of IFN-gamma dependent anti-mycobacterial systemic immunity (PubMed:26160376).Isoform 2: Essential for thymopoiesis and the development of several secondary lymphoid tissues, including lymph nodes and Peyer's patches. Required for the generation of LTi (lymphoid tissue inducer) cells. Regulates thymocyte survival through DNA-binding on ROREs of target gene promoter regions and recruitment of coactivaros via the AF-2. Also plays a key role, downstream of IL6 and TGFB and synergistically with RORA, for lineage specification of uncommitted CD4(+) T-helper (T(H)) cells into T(H)17 cells, antagonizing the T(H)1 program. Probably regulates IL17 and IL17F expression on T(H) by binding to the essential enhancer conserved non-coding sequence 2 (CNS2) in the IL17-IL17F locus. May also play a role in the pre-TCR activation cascade leading to the maturation of alpha/beta T-cells and may participate in the regulation of DNA accessibility in the TCR-J(alpha) locus.
- Gene Name:
- RORC
- Uniprot ID:
- P51449
- Molecular Weight:
- 58194.845 Da
References
- Sipes NS, Martin MT, Kothiya P, Reif DM, Judson RS, Richard AM, Houck KA, Dix DJ, Kavlock RJ, Knudsen TB: Profiling 976 ToxCast chemicals across 331 enzymatic and receptor signaling assays. Chem Res Toxicol. 2013 Jun 17;26(6):878-95. doi: 10.1021/tx400021f. Epub 2013 May 16. [23611293 ]