Resiniferatoxin
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Basic Info
Common Name | Resiniferatoxin(F04798) |
2D Structure | |
Description | Resiniferatoxin (RTX) is a plant toxin and ultrapotent capsaicin analog that occurs in various species of plants, such as resin spurge (Euphorbia resinifera). It evokes a powerful irritant effect followed by desensitization and analgesia. (L1244) |
FRCD ID | F04798 |
CAS Number | 57444-62-9 |
PubChem CID | 104826 |
Formula | C37H40O9 |
IUPAC Name | None |
InChI Key | DSDNAKHZNJAGHN-IHCAYWNCSA-N |
InChI | InChI=1S/C37H40O9/c1-21(2)35-17-23(4)37-27(33(35)44-36(45-35,46-37)19-24-9-7-6-8-10-24)14-26(18-34(41)30(37)13-22(3)32(34)40)20-43-31(39)16-25-11-12-28(38)29(15-25)42-5/h6-15,23,27,30,33,38,41H,1,16-20H2,2-5H3/t23-,27+,30-,33-,34-,35-,36?,37-/m1/s1 |
Canonical SMILES | CC1CC2(C3C4C1(C5C=C(C(=O)C5(CC(=C4)COC(=O)CC6=CC(=C(C=C6)O)OC)O)C)OC(O3)(O2)CC7=CC=CC=C7)C(=C)C |
Isomeric SMILES | C[C@@H]1C[C@]2([C@H]3[C@H]4[C@]1([C@@H]5C=C(C(=O)[C@]5(CC(=C4)COC(=O)CC6=CC(=C(C=C6)O)OC)O)C)OC(O3)(O2)CC7=CC=CC=C7)C(=C)C |
Wikipedia | Resiniferatoxin |
Synonyms | Resiniferatoxin 57444-62-9 RTX AC1L2XKN SCHEMBL12936216 BDBM20285 MolPort-005-940-882 AKOS015967267 LS-28836 20085-EP2308848A1 |
Classifies | Plant Toxin |
Update Date | Nov 13, 2018 17:07 |
Chemical Taxonomy
Kingdom | Organic compounds |
Superclass | Lipids and lipid-like molecules |
Class | Prenol lipids |
Subclass | Diterpenoids |
Intermediate Tree Nodes | Not available |
Direct Parent | Rhamnofolane and daphnane diterpenoids |
Alternative Parents |
|
Molecular Framework | Aromatic heteropolycyclic compounds |
Substituents | Daphnane diterpenoid - Methoxyphenol - Phenoxy compound - Anisole - Methoxybenzene - Phenol ether - 1-hydroxy-2-unsubstituted benzenoid - 1,3-dioxepane - Alkyl aryl ether - Carboxylic acid orthoester - Dioxepane - Phenol - Ortho ester - Meta-dioxane - Monocyclic benzene moiety - Benzenoid - Tertiary alcohol - Meta-dioxolane - Ketone - Carboxylic acid ester - Orthocarboxylic acid derivative - Ether - Organoheterocyclic compound - Oxacycle - Carboxylic acid derivative - Monocarboxylic acid or derivatives - Carbonyl group - Hydrocarbon derivative - Organic oxide - Alcohol - Organic oxygen compound - Organooxygen compound - Aromatic heteropolycyclic compound |
Description | This compound belongs to the class of organic compounds known as rhamnofolane and daphnane diterpenoids. These are diterpenoids with a structure based on one the rhamnofolane or daphnane skeleton. The rhamnofolane and daphnane skeletons are closely related, being formally derived from casbane by two cyclizations (6,10 and 5,14) followed by cleavage of the 1,15 (daphnane) or 2,15 (rhamnofolane) cyclopropane bonds. |
Properties
Property Name | Property Value |
---|---|
Molecular Weight | 628.718 |
Hydrogen Bond Donor Count | 2 |
Hydrogen Bond Acceptor Count | 9 |
Rotatable Bond Count | 9 |
Complexity | 1330 |
Monoisotopic Mass | 628.267 |
Exact Mass | 628.267 |
XLogP | 4.5 |
Formal Charge | 0 |
Heavy Atom Count | 46 |
Defined Atom Stereocenter Count | 7 |
Undefined Atom Stereocenter Count | 1 |
Defined Bond Stereocenter Count | 0 |
Undefined Bond Stereocenter Count | 0 |
Isotope Atom Count | 0 |
Covalently-Bonded Unit Count | 1 |
ADMET
Model | Result | Probability |
---|---|---|
Absorption | ||
Blood-Brain Barrier | BBB+ | 0.5990 |
Human Intestinal Absorption | HIA+ | 0.8464 |
Caco-2 Permeability | Caco2- | 0.6017 |
P-glycoprotein Substrate | Substrate | 0.8899 |
P-glycoprotein Inhibitor | Inhibitor | 0.7963 |
Non-inhibitor | 0.5276 | |
Renal Organic Cation Transporter | Non-inhibitor | 0.8185 |
Distribution | ||
Subcellular localization | Mitochondria | 0.7072 |
Metabolism | ||
CYP450 2C9 Substrate | Non-substrate | 0.8590 |
CYP450 2D6 Substrate | Non-substrate | 0.8467 |
CYP450 3A4 Substrate | Substrate | 0.7345 |
CYP450 1A2 Inhibitor | Non-inhibitor | 0.6836 |
CYP450 2C9 Inhibitor | Non-inhibitor | 0.7855 |
CYP450 2D6 Inhibitor | Non-inhibitor | 0.9175 |
CYP450 2C19 Inhibitor | Non-inhibitor | 0.7399 |
CYP450 3A4 Inhibitor | Inhibitor | 0.5918 |
CYP Inhibitory Promiscuity | Low CYP Inhibitory Promiscuity | 0.7577 |
Excretion | ||
Toxicity | ||
Human Ether-a-go-go-Related Gene Inhibition | Weak inhibitor | 0.9381 |
Non-inhibitor | 0.6859 | |
AMES Toxicity | Non AMES toxic | 0.6839 |
Carcinogens | Non-carcinogens | 0.9378 |
Fish Toxicity | High FHMT | 0.9997 |
Tetrahymena Pyriformis Toxicity | High TPT | 0.9994 |
Honey Bee Toxicity | High HBT | 0.8047 |
Biodegradation | Not ready biodegradable | 0.9962 |
Acute Oral Toxicity | I | 0.4609 |
Carcinogenicity (Three-class) | Non-required | 0.5564 |
Model | Value | Unit |
---|---|---|
Absorption | ||
Aqueous solubility | -4.5402 | LogS |
Caco-2 Permeability | 0.6478 | LogPapp, cm/s |
Distribution | ||
Metabolism | ||
Excretion | ||
Toxicity | ||
Rat Acute Toxicity | 3.9178 | LD50, mol/kg |
Fish Toxicity | -0.2179 | pLC50, mg/L |
Tetrahymena Pyriformis Toxicity | 1.2627 | pIGC50, ug/L |
Targets
- General Function:
- Transmembrane signaling receptor activity
- Specific Function:
- Ligand-activated non-selective calcium permeant cation channel involved in detection of noxious chemical and thermal stimuli. Seems to mediate proton influx and may be involved in intracellular acidosis in nociceptive neurons. Involved in mediation of inflammatory pain and hyperalgesia. Sensitized by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases, which involves PKC isozymes and PCL. Can be activated by endogenous compounds, including 12-hydroperoxytetraenoic acid and bradykinin. Acts as ionotropic endocannabinoid receptor with central neuromodulatory effects. Triggers a form of long-term depression (TRPV1-LTD) mediated by the endocannabinoid anandamine in the hippocampus and nucleus accumbens by affecting AMPA receptors endocytosis (By similarity). Activation by vanilloids, like capsaicin, and temperatures higher than 42 degrees Celsius, exhibits a time- and Ca(2+)-dependent outward rectification, followed by a long-lasting refractory state. Mild extracellular acidic pH (6.5) potentiates channel activation by noxious heat and vanilloids, whereas acidic conditions (pH <6) directly activate the channel.
- Gene Name:
- TRPV1
- Uniprot ID:
- Q8NER1
- Molecular Weight:
- 94955.33 Da
- Mechanism of Action:
- Resiniferatoxin activates the vanilloid receptor in a subpopulation of primary afferent sensory neurons involved in nociception (the transmission of physiological pain). RTX causes a novel ion channel in the plasma membrane of sensory neurons, the transient receptor potential vanilloid 1, to become permeable to cations, most particularly the calcium cation. This evokes a powerful irritant effect followed by desensitization and analgesia.
References
- Bisogno T, Hanus L, De Petrocellis L, Tchilibon S, Ponde DE, Brandi I, Moriello AS, Davis JB, Mechoulam R, Di Marzo V: Molecular targets for cannabidiol and its synthetic analogues: effect on vanilloid VR1 receptors and on the cellular uptake and enzymatic hydrolysis of anandamide. Br J Pharmacol. 2001 Oct;134(4):845-52. [11606325 ]