Basic Info

Common NameResiniferatoxin(F04798)
2D Structure
Description

Resiniferatoxin (RTX) is a plant toxin and ultrapotent capsaicin analog that occurs in various species of plants, such as resin spurge (Euphorbia resinifera). It evokes a powerful irritant effect followed by desensitization and analgesia. (L1244)

FRCD IDF04798
CAS Number57444-62-9
PubChem CID104826
FormulaC37H40O9
IUPAC Name

None

InChI Key

DSDNAKHZNJAGHN-IHCAYWNCSA-N

InChI

InChI=1S/C37H40O9/c1-21(2)35-17-23(4)37-27(33(35)44-36(45-35,46-37)19-24-9-7-6-8-10-24)14-26(18-34(41)30(37)13-22(3)32(34)40)20-43-31(39)16-25-11-12-28(38)29(15-25)42-5/h6-15,23,27,30,33,38,41H,1,16-20H2,2-5H3/t23-,27+,30-,33-,34-,35-,36?,37-/m1/s1

Canonical SMILES

CC1CC2(C3C4C1(C5C=C(C(=O)C5(CC(=C4)COC(=O)CC6=CC(=C(C=C6)O)OC)O)C)OC(O3)(O2)CC7=CC=CC=C7)C(=C)C

Isomeric SMILES

C[C@@H]1C[C@]2([C@H]3[C@H]4[C@]1([C@@H]5C=C(C(=O)[C@]5(CC(=C4)COC(=O)CC6=CC(=C(C=C6)O)OC)O)C)OC(O3)(O2)CC7=CC=CC=C7)C(=C)C

WikipediaResiniferatoxin
Synonyms
        
            Resiniferatoxin
        
            57444-62-9
        
            RTX
        
            AC1L2XKN
        
            SCHEMBL12936216
        
            BDBM20285
        
            MolPort-005-940-882
        
            AKOS015967267
        
            LS-28836
        
            20085-EP2308848A1
        
Classifies
                

                  
                    Plant Toxin
                  

                
        
Update DateNov 13, 2018 17:07

Chemical Taxonomy

KingdomOrganic compounds
SuperclassLipids and lipid-like molecules
ClassPrenol lipids
SubclassDiterpenoids
Intermediate Tree NodesNot available
Direct ParentRhamnofolane and daphnane diterpenoids
Alternative Parents
Molecular FrameworkAromatic heteropolycyclic compounds
SubstituentsDaphnane diterpenoid - Methoxyphenol - Phenoxy compound - Anisole - Methoxybenzene - Phenol ether - 1-hydroxy-2-unsubstituted benzenoid - 1,3-dioxepane - Alkyl aryl ether - Carboxylic acid orthoester - Dioxepane - Phenol - Ortho ester - Meta-dioxane - Monocyclic benzene moiety - Benzenoid - Tertiary alcohol - Meta-dioxolane - Ketone - Carboxylic acid ester - Orthocarboxylic acid derivative - Ether - Organoheterocyclic compound - Oxacycle - Carboxylic acid derivative - Monocarboxylic acid or derivatives - Carbonyl group - Hydrocarbon derivative - Organic oxide - Alcohol - Organic oxygen compound - Organooxygen compound - Aromatic heteropolycyclic compound
DescriptionThis compound belongs to the class of organic compounds known as rhamnofolane and daphnane diterpenoids. These are diterpenoids with a structure based on one the rhamnofolane or daphnane skeleton. The rhamnofolane and daphnane skeletons are closely related, being formally derived from casbane by two cyclizations (6,10 and 5,14) followed by cleavage of the 1,15 (daphnane) or 2,15 (rhamnofolane) cyclopropane bonds.

Properties

Property NameProperty Value
Molecular Weight628.718
Hydrogen Bond Donor Count2
Hydrogen Bond Acceptor Count9
Rotatable Bond Count9
Complexity1330
Monoisotopic Mass628.267
Exact Mass628.267
XLogP4.5
Formal Charge0
Heavy Atom Count46
Defined Atom Stereocenter Count7
Undefined Atom Stereocenter Count1
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count0
Isotope Atom Count0
Covalently-Bonded Unit Count1

ADMET

Model Result Probability
Absorption
Blood-Brain BarrierBBB+0.5990
Human Intestinal AbsorptionHIA+0.8464
Caco-2 PermeabilityCaco2-0.6017
P-glycoprotein SubstrateSubstrate0.8899
P-glycoprotein InhibitorInhibitor0.7963
Non-inhibitor0.5276
Renal Organic Cation TransporterNon-inhibitor0.8185
Distribution
Subcellular localizationMitochondria0.7072
Metabolism
CYP450 2C9 SubstrateNon-substrate0.8590
CYP450 2D6 SubstrateNon-substrate0.8467
CYP450 3A4 SubstrateSubstrate0.7345
CYP450 1A2 InhibitorNon-inhibitor0.6836
CYP450 2C9 InhibitorNon-inhibitor0.7855
CYP450 2D6 InhibitorNon-inhibitor0.9175
CYP450 2C19 InhibitorNon-inhibitor0.7399
CYP450 3A4 InhibitorInhibitor0.5918
CYP Inhibitory PromiscuityLow CYP Inhibitory Promiscuity0.7577
Excretion
Toxicity
Human Ether-a-go-go-Related Gene InhibitionWeak inhibitor0.9381
Non-inhibitor0.6859
AMES ToxicityNon AMES toxic0.6839
CarcinogensNon-carcinogens0.9378
Fish ToxicityHigh FHMT0.9997
Tetrahymena Pyriformis ToxicityHigh TPT0.9994
Honey Bee ToxicityHigh HBT0.8047
BiodegradationNot ready biodegradable0.9962
Acute Oral ToxicityI0.4609
Carcinogenicity (Three-class)Non-required0.5564

Model Value Unit
Absorption
Aqueous solubility-4.5402LogS
Caco-2 Permeability0.6478LogPapp, cm/s
Distribution
Metabolism
Excretion
Toxicity
Rat Acute Toxicity3.9178LD50, mol/kg
Fish Toxicity-0.2179pLC50, mg/L
Tetrahymena Pyriformis Toxicity1.2627pIGC50, ug/L

Targets

General Function:
Transmembrane signaling receptor activity
Specific Function:
Ligand-activated non-selective calcium permeant cation channel involved in detection of noxious chemical and thermal stimuli. Seems to mediate proton influx and may be involved in intracellular acidosis in nociceptive neurons. Involved in mediation of inflammatory pain and hyperalgesia. Sensitized by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases, which involves PKC isozymes and PCL. Can be activated by endogenous compounds, including 12-hydroperoxytetraenoic acid and bradykinin. Acts as ionotropic endocannabinoid receptor with central neuromodulatory effects. Triggers a form of long-term depression (TRPV1-LTD) mediated by the endocannabinoid anandamine in the hippocampus and nucleus accumbens by affecting AMPA receptors endocytosis (By similarity). Activation by vanilloids, like capsaicin, and temperatures higher than 42 degrees Celsius, exhibits a time- and Ca(2+)-dependent outward rectification, followed by a long-lasting refractory state. Mild extracellular acidic pH (6.5) potentiates channel activation by noxious heat and vanilloids, whereas acidic conditions (pH <6) directly activate the channel.
Gene Name:
TRPV1
Uniprot ID:
Q8NER1
Molecular Weight:
94955.33 Da
Mechanism of Action:
Resiniferatoxin activates the vanilloid receptor in a subpopulation of primary afferent sensory neurons involved in nociception (the transmission of physiological pain). RTX causes a novel ion channel in the plasma membrane of sensory neurons, the transient receptor potential vanilloid 1, to become permeable to cations, most particularly the calcium cation. This evokes a powerful irritant effect followed by desensitization and analgesia.
References
  1. Bisogno T, Hanus L, De Petrocellis L, Tchilibon S, Ponde DE, Brandi I, Moriello AS, Davis JB, Mechoulam R, Di Marzo V: Molecular targets for cannabidiol and its synthetic analogues: effect on vanilloid VR1 receptors and on the cellular uptake and enzymatic hydrolysis of anandamide. Br J Pharmacol. 2001 Oct;134(4):845-52. [11606325 ]