L-Cysteine
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Basic Info
Common Name | L-Cysteine(F05242) |
2D Structure | |
Description | Cysteine is a uremic toxin. Uremic toxins can be subdivided into three major groups based upon their chemical and physical characteristics: 1) small, water-soluble, non-protein-bound compounds, such as urea; 2) small, lipid-soluble and/or protein-bound compounds, such as the phenols and 3) larger so-called middle-molecules, such as beta2-microglobulin. Chronic exposure of uremic toxins can lead to a number of conditions including renal damage, chronic kidney disease and cardiovascular disease. |
FRCD ID | F05242 |
CAS Number | 52-90-4 |
PubChem CID | 5862 |
Formula | C3H7NO2S |
IUPAC Name | (2R)-2-amino-3-sulfanylpropanoic acid |
InChI Key | XUJNEKJLAYXESH-REOHCLBHSA-N |
InChI | InChI=1S/C3H7NO2S/c4-2(1-7)3(5)6/h2,7H,1,4H2,(H,5,6)/t2-/m0/s1 |
Canonical SMILES | C(C(C(=O)O)N)S |
Isomeric SMILES | C([C@@H](C(=O)O)N)S |
Wikipedia | L-Cysteine |
Synonyms | (R)-Cysteine L-cysteine 52-90-4 cysteine Cystein Half-cystine Thioserine (R)-2-Amino-3-mercaptopropanoic acid L-(+)-Cysteine L-Cystein |
Classifies | Predicted: Animal Toxin |
Update Date | Nov 13, 2018 17:07 |
Chemical Taxonomy
Kingdom | Organic compounds |
Superclass | Organic acids and derivatives |
Class | Carboxylic acids and derivatives |
Subclass | Amino acids, peptides, and analogues |
Intermediate Tree Nodes | Amino acids and derivatives - Alpha amino acids and derivatives |
Direct Parent | Cysteine and derivatives |
Alternative Parents | |
Molecular Framework | Aliphatic acyclic compounds |
Substituents | Cysteine or derivatives - Alpha-amino acid - L-alpha-amino acid - Amino acid - Alkylthiol - Carboxylic acid - Monocarboxylic acid or derivatives - Organic oxygen compound - Primary amine - Organosulfur compound - Organooxygen compound - Organonitrogen compound - Organic nitrogen compound - Primary aliphatic amine - Carbonyl group - Amine - Hydrocarbon derivative - Organopnictogen compound - Organic oxide - Aliphatic acyclic compound |
Description | This compound belongs to the class of organic compounds known as cysteine and derivatives. These are compounds containing cysteine or a derivative thereof resulting from reaction of cysteine at the amino group or the carboxy group, or from the replacement of any hydrogen of glycine by a heteroatom. |
Properties
Property Name | Property Value |
---|---|
Molecular Weight | 121.154 |
Hydrogen Bond Donor Count | 3 |
Hydrogen Bond Acceptor Count | 4 |
Rotatable Bond Count | 2 |
Complexity | 75.3 |
Monoisotopic Mass | 121.02 |
Exact Mass | 121.02 |
XLogP | -2.5 |
Formal Charge | 0 |
Heavy Atom Count | 7 |
Defined Atom Stereocenter Count | 1 |
Undefined Atom Stereocenter Count | 0 |
Defined Bond Stereocenter Count | 0 |
Undefined Bond Stereocenter Count | 0 |
Isotope Atom Count | 0 |
Covalently-Bonded Unit Count | 1 |
ADMET
Model | Result | Probability |
---|---|---|
Absorption | ||
Blood-Brain Barrier | BBB+ | 0.5918 |
Human Intestinal Absorption | HIA+ | 0.9698 |
Caco-2 Permeability | Caco2- | 0.7210 |
P-glycoprotein Substrate | Non-substrate | 0.8141 |
P-glycoprotein Inhibitor | Non-inhibitor | 0.9840 |
Non-inhibitor | 0.9903 | |
Renal Organic Cation Transporter | Non-inhibitor | 0.9462 |
Distribution | ||
Subcellular localization | Lysosome | 0.7697 |
Metabolism | ||
CYP450 2C9 Substrate | Non-substrate | 0.8473 |
CYP450 2D6 Substrate | Non-substrate | 0.8141 |
CYP450 3A4 Substrate | Non-substrate | 0.8245 |
CYP450 1A2 Inhibitor | Non-inhibitor | 0.9400 |
CYP450 2C9 Inhibitor | Non-inhibitor | 0.9584 |
CYP450 2D6 Inhibitor | Non-inhibitor | 0.9665 |
CYP450 2C19 Inhibitor | Non-inhibitor | 0.9634 |
CYP450 3A4 Inhibitor | Non-inhibitor | 0.9602 |
CYP Inhibitory Promiscuity | Low CYP Inhibitory Promiscuity | 0.9888 |
Excretion | ||
Toxicity | ||
Human Ether-a-go-go-Related Gene Inhibition | Weak inhibitor | 0.9891 |
Non-inhibitor | 0.9684 | |
AMES Toxicity | AMES toxic | 0.9107 |
Carcinogens | Non-carcinogens | 0.7998 |
Fish Toxicity | Low FHMT | 0.7709 |
Tetrahymena Pyriformis Toxicity | Low TPT | 0.9922 |
Honey Bee Toxicity | Low HBT | 0.5092 |
Biodegradation | Ready biodegradable | 0.7577 |
Acute Oral Toxicity | III | 0.8014 |
Carcinogenicity (Three-class) | Non-required | 0.7251 |
Model | Value | Unit |
---|---|---|
Absorption | ||
Aqueous solubility | 0.1127 | LogS |
Caco-2 Permeability | 0.2031 | LogPapp, cm/s |
Distribution | ||
Metabolism | ||
Excretion | ||
Toxicity | ||
Rat Acute Toxicity | 1.7757 | LD50, mol/kg |
Fish Toxicity | 3.0761 | pLC50, mg/L |
Tetrahymena Pyriformis Toxicity | -0.8730 | pIGC50, ug/L |
References
Title | Journal | Date | Pubmed ID |
---|---|---|---|
Cooking methods employing natural anti-oxidant food additives effectively reducedconcentration of nephrotoxic and carcinogenic aristolochic acids in contaminated food grains. | Food Chem | 2018 Oct 30 | 29853376 |
Highly sensitive visual detection of amantadine residues in poultry at the ppblevel: A colorimetric immunoassay based on a Fenton reaction and goldnanoparticles aggregation. | Anal Chim Acta | 2018 Oct 16 | 29866262 |
Impurity profiling of the most frequently encountered falsified polypeptide drugs on the Belgian market. | Talanta | 2018 Oct 1 | 30029448 |
The possible protective effect of N-acetyl-L-cysteine and folic acid in combination against aspartame-induced cerebral cortex neurotoxicity in adult male rats: a light and transmission electron microscopic study. | Ultrastruct Pathol | 2018 May-Jun | 29482444 |
Patulin induced ROS-dependent autophagic cell death in Human Hepatoma G2 cells. | Chem Biol Interact | 2018 May 25 | 29604266 |
The Auxiliary Role of the Amidase Domain in Cell Wall Binding and ExolyticActivity of Staphylococcal Phage Endolysins. | Viruses | 2018 May 25 | 29799482 |
Reduction of RuVI≡N to RuIII-NH3 by Cysteine in Aqueous Solution. | Inorg Chem | 2018 May 21 | 29708333 |
In vitro evaluation of dietary compounds to reduce mercury bioavailability. | Food Chem | 2018 May 15 | 29329865 |
Generation of 2-Furfurylthiol by Carbon-Sulfur Lyase from the Baijiu YeastSaccharomyces cerevisiae G20. | J Agric Food Chem | 2018 Mar 7 | 29436228 |
Elusive Chemistry of Hydrogen Sulfide and Mercaptans in Wine. | J Agric Food Chem | 2018 Mar 14 | 28960073 |
The improved growth performance and enhanced immune function byDL-methionyl-DL-methionine are associated with NF-κB and TOR signalling inintestine of juvenile grass carp (Ctenopharyngodon idella). | Fish Shellfish Immunol | 2018 Mar | 29292200 |
Reappraisal of metallothionein: Clinical implications for patients with diabetes mellitus. | J Diabetes | 2018 Mar | 29072367 |
Revealing the inhibitory potential of Yersinia enterocolitica on cysteineproteases of the papain family. | Microbiol Res | 2018 Mar | 29458857 |
Antioxidant Peptides from Goat Milk Fermented by Lactobacillus casei L61:Preparation, Optimization, and Stability Evaluation in Simulated GastrointestinalFluid. | Nutrients | 2018 Jun 20 | 29925814 |
Vitamin C in Cancer: A Metabolomics Perspective. | Front Physiol | 2018 Jun 19 | 29971019 |
Anti-inflammatory Activity of 8-Hydroxydaidzein in LPS-Stimulated BV2 Microglial Cells via Activation of Nrf2-Antioxidant and Attenuation of Akt/NF-κB-Inflammatory Signaling Pathways, as Well As Inhibition of COX-2 Activity. | J Agric Food Chem | 2018 Jun 13 | 29790749 |
Cysteine Desulfurase IscS2 Plays a Role in Oxygen Resistance in Clostridiumdifficile. | Infect Immun | 2018 Jul 23 | 29866903 |
Evaluation of different saccharides and chitin as eco-friendly additive toimprove the magnetic cross-linked enzyme aggregates (CLEAs) activities. | Int J Biol Macromol | 2018 Jul 20 | 30009910 |
Computational and biochemical studies of isothiocyanates as inhibitors ofproteasomal cysteine deubiquitinases in human cancer cells. | J Cell Biochem | 2018 Jul 17 | 30015387 |
Glucosamine prevents polarization of cytotoxic granules in NK-92 cells bydisturbing FOXO1/ERK/paxillin phosphorylation. | PLoS One | 2018 Jul 17 | 30016365 |
Targets
- General Function:
- Glutamate-cysteine ligase catalytic subunit binding
- Gene Name:
- GCLM
- Uniprot ID:
- P48507
- Molecular Weight:
- 30726.745 Da
References
- Ashida H, Sawa Y, Shibata H: Cloning, biochemical and phylogenetic characterizations of gamma-glutamylcysteine synthetase from Anabaena sp. PCC 7120. Plant Cell Physiol. 2005 Apr;46(4):557-62. Epub 2005 Feb 2. [15695431 ]
- General Function:
- Protein homodimerization activity
- Gene Name:
- GSS
- Uniprot ID:
- P48637
- Molecular Weight:
- 52384.325 Da
References
- Tanaka T, Halicka HD, Huang X, Traganos F, Darzynkiewicz Z: Constitutive histone H2AX phosphorylation and ATM activation, the reporters of DNA damage by endogenous oxidants. Cell Cycle. 2006 Sep;5(17):1940-5. Epub 2006 Sep 1. [16940754 ]
- General Function:
- Protein kinase binding
- Specific Function:
- Motor protein required for establishing a bipolar spindle. Blocking of KIF11 prevents centrosome migration and arrest cells in mitosis with monoastral microtubule arrays.
- Gene Name:
- KIF11
- Uniprot ID:
- P52732
- Molecular Weight:
- 119158.025 Da
References
- Schulz AM, Terne C, Jankowski V, Cohen G, Schaefer M, Boehringer F, Tepel M, Kunkel D, Zidek W, Jankowski J: Modulation of NADPH oxidase activity by known uraemic retention solutes. Eur J Clin Invest. 2014 Aug;44(8):802-11. doi: 10.1111/eci.12297. [25041433 ]
- General Function:
- Pyridoxal phosphate binding
- Specific Function:
- Catalyzes the removal of elemental sulfur from cysteine to produce alanine. It supplies the inorganic sulfur for iron-sulfur (Fe-S) clusters. May be involved in the biosynthesis of molybdenum cofactor.
- Gene Name:
- NFS1
- Uniprot ID:
- Q9Y697
- Molecular Weight:
- 50195.21 Da
References
- You D, Wang L, Yao F, Zhou X, Deng Z: A novel DNA modification by sulfur: DndA is a NifS-like cysteine desulfurase capable of assembling DndC as an iron-sulfur cluster protein in Streptomyces lividans. Biochemistry. 2007 May 22;46(20):6126-33. Epub 2007 May 1. [17469805 ]
- General Function:
- Iron ion binding
- Gene Name:
- CDO-1
- Uniprot ID:
- Q16857
- Molecular Weight:
- 6589.415 Da
References
- Jin HF, DU SX, Zhao X, Zhang SQ, Tian Y, Bu DF, Tang CS, DU JB: [Significance of endogenous sulfur dioxide in the regulation of cardiovascular system]. Beijing Da Xue Xue Bao. 2007 Aug 18;39(4):423-5. [17657274 ]
- General Function:
- Ferrous iron binding
- Specific Function:
- Initiates several important metabolic pathways related to pyruvate and several sulfurate compounds including sulfate, hypotaurine and taurine. Critical regulator of cellular cysteine concentrations. Has an important role in maintaining the hepatic concentation of intracellular free cysteine within a proper narrow range.
- Gene Name:
- CDO1
- Uniprot ID:
- Q16878
- Molecular Weight:
- 22971.745 Da
References
- Jin HF, DU SX, Zhao X, Zhang SQ, Tian Y, Bu DF, Tang CS, DU JB: [Significance of endogenous sulfur dioxide in the regulation of cardiovascular system]. Beijing Da Xue Xue Bao. 2007 Aug 18;39(4):423-5. [17657274 ]
- General Function:
- Pyridoxal phosphate binding
- Specific Function:
- Biosynthesis of L-glutamate from L-aspartate or L-cysteine. Important regulator of levels of glutamate, the major excitatory neurotransmitter of the vertebrate central nervous system. Acts as a scavenger of glutamate in brain neuroprotection. The aspartate aminotransferase activity is involved in hepatic glucose synthesis during development and in adipocyte glyceroneogenesis. Using L-cysteine as substrate, regulates levels of mercaptopyruvate, an important source of hydrogen sulfide. Mercaptopyruvate is converted into H(2)S via the action of 3-mercaptopyruvate sulfurtransferase (3MST). Hydrogen sulfide is an important synaptic modulator and neuroprotectant in the brain.
- Gene Name:
- GOT1
- Uniprot ID:
- P17174
- Molecular Weight:
- 46247.14 Da
References
- Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [17139284 ]
- General Function:
- Magnesium ion binding
- Gene Name:
- GCLC
- Uniprot ID:
- P48506
- Molecular Weight:
- 72765.14 Da
References
- Ashida H, Sawa Y, Shibata H: Cloning, biochemical and phylogenetic characterizations of gamma-glutamylcysteine synthetase from Anabaena sp. PCC 7120. Plant Cell Physiol. 2005 Apr;46(4):557-62. Epub 2005 Feb 2. [15695431 ]
- General Function:
- Thiamine uptake transmembrane transporter activity
- Specific Function:
- Mediates high affinity thiamine uptake, propably via a proton anti-port mechanism. Has no folate transport activity.
- Gene Name:
- SLC19A3
- Uniprot ID:
- Q9BZV2
- Molecular Weight:
- 55664.265 Da
References
- Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [17139284 ]
- General Function:
- Cystine:glutamate antiporter activity
- Specific Function:
- Sodium-independent, high-affinity exchange of anionic amino acids with high specificity for anionic form of cystine and glutamate.
- Gene Name:
- SLC7A11
- Uniprot ID:
- Q9UPY5
- Molecular Weight:
- 55422.44 Da
References
- Schulz AM, Terne C, Jankowski V, Cohen G, Schaefer M, Boehringer F, Tepel M, Kunkel D, Zidek W, Jankowski J: Modulation of NADPH oxidase activity by known uraemic retention solutes. Eur J Clin Invest. 2014 Aug;44(8):802-11. doi: 10.1111/eci.12297. [25041433 ]
- General Function:
- L-proline transmembrane transporter activity
- Specific Function:
- Neutral amino acid/proton symporter. Has a pH-dependent electrogenic transport activity for small amino acids such as glycine, alanine and proline. Besides small apolar L-amino acids, it also recognize their D-enantiomers and selected amino acid derivatives such as gamma-aminobutyric acid (By similarity).
- Gene Name:
- SLC36A1
- Uniprot ID:
- Q7Z2H8
- Molecular Weight:
- 53075.045 Da
References
- Schulz AM, Terne C, Jankowski V, Cohen G, Schaefer M, Boehringer F, Tepel M, Kunkel D, Zidek W, Jankowski J: Modulation of NADPH oxidase activity by known uraemic retention solutes. Eur J Clin Invest. 2014 Aug;44(8):802-11. doi: 10.1111/eci.12297. [25041433 ]
- General Function:
- Superoxide-generating nadph oxidase activity
- Specific Function:
- Constitutive NADPH oxidase which generates superoxide intracellularly upon formation of a complex with CYBA/p22phox. Regulates signaling cascades probably through phosphatases inhibition. May function as an oxygen sensor regulating the KCNK3/TASK-1 potassium channel and HIF1A activity. May regulate insulin signaling cascade. May play a role in apoptosis, bone resorption and lipolysaccharide-mediated activation of NFKB. May produce superoxide in the nucleus and play a role in regulating gene expression upon cell stimulation. Isoform 3 is not functional. Isoform 5 and isoform 6 display reduced activity.Isoform 4: Involved in redox signaling in vascular cells. Constitutively and NADPH-dependently generates reactive oxygen species (ROS). Modulates the nuclear activation of ERK1/2 and the ELK1 transcription factor, and is capable of inducing nuclear DNA damage. Displays an increased activity relative to isoform 1.
- Gene Name:
- NOX4
- Uniprot ID:
- Q9NPH5
- Molecular Weight:
- 66930.995 Da
References
- Schulz AM, Terne C, Jankowski V, Cohen G, Schaefer M, Boehringer F, Tepel M, Kunkel D, Zidek W, Jankowski J: Modulation of NADPH oxidase activity by known uraemic retention solutes. Eur J Clin Invest. 2014 Aug;44(8):802-11. doi: 10.1111/eci.12297. [25041433 ]
- General Function:
- Sodium-independent organic anion transmembrane transporter activity
- Specific Function:
- Plays an important role in the excretion/detoxification of endogenous and exogenous organic anions, especially from the brain and kidney. Involved in the transport basolateral of steviol, fexofenadine. Transports benzylpenicillin (PCG), estrone-3-sulfate (E1S), cimetidine (CMD), 2,4-dichloro-phenoxyacetate (2,4-D), p-amino-hippurate (PAH), acyclovir (ACV) and ochratoxin (OTA).
- Gene Name:
- SLC22A8
- Uniprot ID:
- Q8TCC7
- Molecular Weight:
- 59855.585 Da
References
- Schulz AM, Terne C, Jankowski V, Cohen G, Schaefer M, Boehringer F, Tepel M, Kunkel D, Zidek W, Jankowski J: Modulation of NADPH oxidase activity by known uraemic retention solutes. Eur J Clin Invest. 2014 Aug;44(8):802-11. doi: 10.1111/eci.12297. [25041433 ]
- General Function:
- Ubiquitin protein ligase binding
- Specific Function:
- Hydro-lyase catalyzing the first step of the transsulfuration pathway, where the hydroxyl group of L-serine is displaced by L-homocysteine in a beta-replacement reaction to form L-cystathionine, the precursor of L-cysteine. This catabolic route allows the elimination of L-methionine and the toxic metabolite L-homocysteine (PubMed:23981774, PubMed:20506325, PubMed:23974653). Also involved in the production of hydrogen sulfide, a gasotransmitter with signaling and cytoprotective effects on neurons (By similarity).
- Gene Name:
- CBS
- Uniprot ID:
- P35520
- Molecular Weight:
- 60586.05 Da
References
- Zhang H, Zhi L, Moore PK, Bhatia M: Role of hydrogen sulfide in cecal ligation and puncture-induced sepsis in the mouse. Am J Physiol Lung Cell Mol Physiol. 2006 Jun;290(6):L1193-201. Epub 2006 Jan 20. [16428267 ]
- General Function:
- Pyridoxal phosphate binding
- Specific Function:
- Catalyzes the last step in the trans-sulfuration pathway from methionine to cysteine. Has broad substrate specificity. Converts cystathionine to cysteine, ammonia and 2-oxobutanoate. Converts two cysteine molecules to lanthionine and hydrogen sulfide. Can also accept homocysteine as substrate. Specificity depends on the levels of the endogenous substrates. Generates the endogenous signaling molecule hydrogen sulfide (H2S), and so contributes to the regulation of blood pressure. Acts as a cysteine-protein sulfhydrase by mediating sulfhydration of target proteins: sulfhydration consists of converting -SH groups into -SSH on specific cysteine residues of target proteins such as GAPDH, PTPN1 and NF-kappa-B subunit RELA, thereby regulating their function.
- Gene Name:
- CTH
- Uniprot ID:
- P32929
- Molecular Weight:
- 44507.64 Da
References
- Fiorucci S, Antonelli E, Mencarelli A, Orlandi S, Renga B, Rizzo G, Distrutti E, Shah V, Morelli A: The third gas: H2S regulates perfusion pressure in both the isolated and perfused normal rat liver and in cirrhosis. Hepatology. 2005 Sep;42(3):539-48. [16108046 ]
- General Function:
- Methyltransferase activity
- Specific Function:
- Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) in DNA. Repairs alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
- Gene Name:
- MGMT
- Uniprot ID:
- P16455
- Molecular Weight:
- 21645.83 Da
References
- Niture SK, Velu CS, Smith QR, Bhat GJ, Srivenugopal KS: Increased expression of the MGMT repair protein mediated by cysteine prodrugs and chemopreventative natural products in human lymphocytes and tumor cell lines. Carcinogenesis. 2007 Feb;28(2):378-89. Epub 2006 Aug 31. [16950796 ]
- General Function:
- Vitamin d binding
- Specific Function:
- May have weak glycosidase activity towards glucuronylated steroids. However, it lacks essential active site Glu residues at positions 239 and 872, suggesting it may be inactive as a glycosidase in vivo. May be involved in the regulation of calcium and phosphorus homeostasis by inhibiting the synthesis of active vitamin D (By similarity). Essential factor for the specific interaction between FGF23 and FGFR1 (By similarity).The Klotho peptide generated by cleavage of the membrane-bound isoform may be an anti-aging circulating hormone which would extend life span by inhibiting insulin/IGF1 signaling.
- Gene Name:
- KL
- Uniprot ID:
- Q9UEF7
- Molecular Weight:
- 116179.815 Da
References
- Schulz AM, Terne C, Jankowski V, Cohen G, Schaefer M, Boehringer F, Tepel M, Kunkel D, Zidek W, Jankowski J: Modulation of NADPH oxidase activity by known uraemic retention solutes. Eur J Clin Invest. 2014 Aug;44(8):802-11. doi: 10.1111/eci.12297. [25041433 ]