Glycerol
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Basic Info
Common Name | Glycerol(F05354) |
2D Structure | |
Description | Glycerol is an important component of triglycerides (i.e. fats and oils) and of phospholipids. glycerol is a three-carbon substance that forms the backbone of fatty acids in fats. When the body uses stored fat as a source of energy, glycerol and fatty acids are released into the bloodstream. The glycerol component can be converted to glucose by the liver and provides energy for cellular metabolism. |
FRCD ID | F05354 |
CAS Number | 56-81-5 |
PubChem CID | 753 |
Formula | C3H8O3 |
IUPAC Name | propane-1,2,3-triol |
InChI Key | PEDCQBHIVMGVHV-UHFFFAOYSA-N |
InChI | InChI=1S/C3H8O3/c4-1-3(6)2-5/h3-6H,1-2H2 |
Canonical SMILES | C(C(CO)O)O |
Isomeric SMILES | C(C(CO)O)O |
Wikipedia | Glycerol |
Synonyms | glycerol glycerin Glycerine 1,2,3-Propanetriol 56-81-5 PROPANE-1,2,3-TRIOL Glycyl alcohol Trihydroxypropane Glyceritol Propanetriol |
Classifies | Animal Toxin |
Update Date | Nov 13, 2018 17:07 |
Chemical Taxonomy
Kingdom | Organic compounds |
Superclass | Organic oxygen compounds |
Class | Organooxygen compounds |
Subclass | Carbohydrates and carbohydrate conjugates |
Intermediate Tree Nodes | Not available |
Direct Parent | Sugar alcohols |
Alternative Parents | |
Molecular Framework | Aliphatic acyclic compounds |
Substituents | Sugar alcohol - Secondary alcohol - Polyol - Hydrocarbon derivative - Primary alcohol - Alcohol - Aliphatic acyclic compound |
Description | This compound belongs to the class of organic compounds known as sugar alcohols. These are hydrogenated forms of carbohydrate in which the carbonyl group (aldehyde or ketone, reducing sugar) has been reduced to a primary or secondary hydroxyl group. |
Properties
Property Name | Property Value |
---|---|
Molecular Weight | 92.094 |
Hydrogen Bond Donor Count | 3 |
Hydrogen Bond Acceptor Count | 3 |
Rotatable Bond Count | 2 |
Complexity | 25.2 |
Monoisotopic Mass | 92.047 |
Exact Mass | 92.047 |
XLogP | -1.8 |
Formal Charge | 0 |
Heavy Atom Count | 6 |
Defined Atom Stereocenter Count | 0 |
Undefined Atom Stereocenter Count | 0 |
Defined Bond Stereocenter Count | 0 |
Undefined Bond Stereocenter Count | 0 |
Isotope Atom Count | 0 |
Covalently-Bonded Unit Count | 1 |
ADMET
Model | Result | Probability |
---|---|---|
Absorption | ||
Blood-Brain Barrier | BBB- | 0.6136 |
Human Intestinal Absorption | HIA+ | 0.9239 |
Caco-2 Permeability | Caco2- | 0.8334 |
P-glycoprotein Substrate | Non-substrate | 0.7076 |
P-glycoprotein Inhibitor | Non-inhibitor | 0.9186 |
Non-inhibitor | 0.9572 | |
Renal Organic Cation Transporter | Non-inhibitor | 0.9307 |
Distribution | ||
Subcellular localization | Mitochondria | 0.6002 |
Metabolism | ||
CYP450 2C9 Substrate | Non-substrate | 0.8881 |
CYP450 2D6 Substrate | Non-substrate | 0.8821 |
CYP450 3A4 Substrate | Non-substrate | 0.7971 |
CYP450 1A2 Inhibitor | Non-inhibitor | 0.7599 |
CYP450 2C9 Inhibitor | Non-inhibitor | 0.9482 |
CYP450 2D6 Inhibitor | Non-inhibitor | 0.9554 |
CYP450 2C19 Inhibitor | Non-inhibitor | 0.8847 |
CYP450 3A4 Inhibitor | Non-inhibitor | 0.9605 |
CYP Inhibitory Promiscuity | Low CYP Inhibitory Promiscuity | 0.9576 |
Excretion | ||
Toxicity | ||
Human Ether-a-go-go-Related Gene Inhibition | Weak inhibitor | 0.9670 |
Non-inhibitor | 0.9280 | |
AMES Toxicity | Non AMES toxic | 0.8278 |
Carcinogens | Non-carcinogens | 0.6884 |
Fish Toxicity | Low FHMT | 0.9489 |
Tetrahymena Pyriformis Toxicity | Low TPT | 0.9933 |
Honey Bee Toxicity | High HBT | 0.6791 |
Biodegradation | Ready biodegradable | 0.8497 |
Acute Oral Toxicity | IV | 0.6414 |
Carcinogenicity (Three-class) | Non-required | 0.6761 |
Model | Value | Unit |
---|---|---|
Absorption | ||
Aqueous solubility | 1.0572 | LogS |
Caco-2 Permeability | -0.0966 | LogPapp, cm/s |
Distribution | ||
Metabolism | ||
Excretion | ||
Toxicity | ||
Rat Acute Toxicity | 0.8954 | LD50, mol/kg |
Fish Toxicity | 3.2632 | pLC50, mg/L |
Tetrahymena Pyriformis Toxicity | -2.0120 | pIGC50, ug/L |
References
Title | Journal | Date | Pubmed ID |
---|---|---|---|
Characterization of food additive-potato starch complexes by FTIR and X-raydiffraction. | Food Chem | 2018 Sep 15 | 29699684 |
Molecular Characterization, Fitness, and Mycotoxin Production of Fusarium asiaticum Strains Resistant to Fludioxonil. | Plant Dis | 2018 Sep | 30125190 |
Mechanical, structural and physical aspects of chitosan-based films as antimicrobial dressings. | Int J Biol Macromol | 2018 Sep | 29727650 |
Salt + Glycerol-Induced Hyperhydration Enhances Fluid Retention More Than Salt-or Glycerol-Induced Hyperhydration. | Int J Sport Nutr Exerc Metab | 2018 May 1 | 29140136 |
Expression of heterologous transporters in Saccharomyces kudriavzevii: A strategyfor improving yeast salt tolerance and fermentation performance. | Int J Food Microbiol | 2018 Mar 2 | 29324287 |
Enhancement of erythritol production by Trichosporonoides oedocephalis ATCC 16958through regulating key enzyme activity and the NADPH/NADP ratio with metal ionsupplementation. | Prep Biochem Biotechnol | 2018 Mar 16 | 29355459 |
Thermally Induced Generation of Desirable Aroma-Active Compounds from theGlucosinolate Sinigrin. | J Agric Food Chem | 2018 Mar 14 | 28629219 |
Incidence of Penicillium verrucosum in Grain Samples from Oat Varieties Commonly Grown in South Dakota. | J Food Prot | 2018 Jun | 29718692 |
Producing novel edible films from semi refined carrageenan (SRC) and ulvanpolysaccharides for potential food applications. | Int J Biol Macromol | 2018 Jun | 29454950 |
Effects of lowering water activity by various humectants on germination of sporesof Bacillus species with different germinants. | Food Microbiol | 2018 Jun | 29407388 |
Mechanisms of the antilipolytic response of human adipocytes to tyramine, a trace amine present in food. | J Physiol Biochem | 2018 Jul 23 | 30039351 |
Variability in Characterizing <i>Escherichia coli</i> from Cattle Feces: A Cautionary Tale. | Microorganisms | 2018 Jul 21 | 30037096 |
From malt to wheat beer: A comprehensive multi-toxin screening, transfer assessment and its influence on basic fermentation parameters. | Food Chem | 2018 Jul 15 | 29548430 |
False flax (Camelina sativa) seed oil as suitable ingredient for the enhancement of physicochemical and biological properties of chitosan films. | Int J Biol Macromol | 2018 Jul 15 | 29630959 |
A new group of synthetic phenolic-containing amphiphilic molecules for multipurpose applications: Physico-chemical characterization and cell-toxicity study. | Sci Rep | 2018 Jan 16 | 29339813 |
Broad range chemical profiling of natural deep eutectic solvent extracts using a high performance thin layer chromatography-based method. | J Chromatogr A | 2018 Jan 12 | 29229334 |
Production and characterization of nanostructured lipid carriers and solid lipid nanoparticles containing lycopene for food fortification. | J Food Sci Technol | 2018 Jan | 29358821 |
Combined effects of simultaneous exposure to six phthalates and emulsifier glycerol monosterate on male reproductive system in rats. | Toxicol Appl Pharmacol | 2018 Feb 15 | 29366639 |
Probiotic effect of Pichia pastoris X-33 produced in parboiled rice effluent and YPD medium on broiler chickens. | PLoS One | 2018 Feb 15 | 29447227 |
Assessing the microstructural and rheological changes induced by food additiveson potato puree. | Food Chem | 2018 Feb 1 | 28946276 |
Targets
- General Function:
- Phospholipase a2 activity
- Specific Function:
- PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides. Has a preference for arachidonic-containing phospholipids.
- Gene Name:
- PLA2G2E
- Uniprot ID:
- Q9NZK7
- Molecular Weight:
- 15988.525 Da
References
- Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [17139284 ]
- General Function:
- Receptor signaling protein activity
- Specific Function:
- GTP-binding protein that functions as an allosteric activator of the cholera toxin catalytic subunit, an ADP-ribosyltransferase. Involved in protein trafficking among different compartments. Modulates vesicle budding and uncoating within the Golgi complex. Deactivation induces the redistribution of the entire Golgi complex to the endoplasmic reticulum, suggesting a crucial role in protein trafficking. In its GTP-bound form, its triggers the association with coat proteins with the Golgi membrane. The hydrolysis of ARF1-bound GTP, which is mediated by ARFGAPs proteins, is required for dissociation of coat proteins from Golgi membranes and vesicles. The GTP-bound form interacts with PICK1 to limit PICK1-mediated inhibition of Arp2/3 complex activity; the function is linked to AMPA receptor (AMPAR) trafficking, regulation of synaptic plasicity of excitatory synapses and spine shrinkage during long-term depression (LTD).
- Gene Name:
- ARF1
- Uniprot ID:
- P84077
- Molecular Weight:
- 20696.62 Da
References
- Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [17139284 ]
- General Function:
- Protein homodimerization activity
- Specific Function:
- Removes terminal alpha-N-acetylgalactosamine residues from glycolipids and glycopeptides. Required for the breakdown of glycolipids.
- Gene Name:
- NAGA
- Uniprot ID:
- P17050
- Molecular Weight:
- 46564.15 Da
References
- Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [17139284 ]
- General Function:
- Sulfate adenylyltransferase (atp) activity
- Specific Function:
- Bifunctional enzyme with both ATP sulfurylase and APS kinase activity, which mediates two steps in the sulfate activation pathway. The first step is the transfer of a sulfate group to ATP to yield adenosine 5'-phosphosulfate (APS), and the second step is the transfer of a phosphate group from ATP to APS yielding 3'-phosphoadenylylsulfate (PAPS: activated sulfate donor used by sulfotransferase). In mammals, PAPS is the sole source of sulfate; APS appears to be only an intermediate in the sulfate-activation pathway. Also involved in the biosynthesis of sulfated L-selectin ligands in endothelial cells.
- Gene Name:
- PAPSS1
- Uniprot ID:
- O43252
- Molecular Weight:
- 70832.725 Da
References
- Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [17139284 ]
- General Function:
- Small molecule binding
- Specific Function:
- This protein is, quantitatively, the main protein synthesized and secreted in the endometrium from mid-luteal phase of the menstrual cycle and during the first semester of pregnancy.
- Gene Name:
- PAEP
- Uniprot ID:
- P09466
- Molecular Weight:
- 20624.015 Da
References
- Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [17139284 ]
- General Function:
- Inositol-3-phosphate synthase activity
- Specific Function:
- Key enzyme in myo-inositol biosynthesis pathway that catalyzes the conversion of glucose 6-phosphate to 1-myo-inositol 1-phosphate in a NAD-dependent manner. Rate-limiting enzyme in the synthesis of all inositol-containing compounds.
- Gene Name:
- ISYNA1
- Uniprot ID:
- Q9NPH2
- Molecular Weight:
- 61067.285 Da
References
- Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [17139284 ]
- General Function:
- S-nitrosoglutathione binding
- Specific Function:
- Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles. Regulates negatively CDK5 activity via p25/p35 translocation to prevent neurodegeneration.
- Gene Name:
- GSTP1
- Uniprot ID:
- P09211
- Molecular Weight:
- 23355.625 Da
References
- Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [17139284 ]
- General Function:
- Protein homodimerization activity
- Specific Function:
- Bifunctional enzyme which catalyzes both the conversion of PGH2 to PGD2, a prostaglandin involved in smooth muscle contraction/relaxation and a potent inhibitor of platelet aggregation, and the conjugation of glutathione with a wide range of aryl halides and organic isothiocyanates. Also exhibits low glutathione-peroxidase activity towards cumene hydroperoxide.
- Gene Name:
- HPGDS
- Uniprot ID:
- O60760
- Molecular Weight:
- 23343.65 Da
References
- Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [17139284 ]
- General Function:
- Trna methyltransferase activity
- Specific Function:
- Specifically methylates cytosine 38 in the anticodon loop of tRNA(Asp).
- Gene Name:
- TRDMT1
- Uniprot ID:
- O14717
- Molecular Weight:
- 44596.17 Da
- General Function:
- Phosphatidylinositol binding
- Specific Function:
- Intracellular channel that mediates calcium release from the endoplasmic reticulum following stimulation by inositol 1,4,5-trisphosphate. Involved in the regulation of epithelial secretion of electrolytes and fluid through the interaction with AHCYL1 (By similarity). Plays a role in ER stress-induced apoptosis. Cytoplasmic calcium released from the ER triggers apoptosis by the activation of CaM kinase II, eventually leading to the activation of downstream apoptosis pathways (By similarity).
- Gene Name:
- ITPR1
- Uniprot ID:
- Q14643
- Molecular Weight:
- 313926.375 Da
References
- Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [17139284 ]
- General Function:
- Type iii transforming growth factor beta receptor binding
- Specific Function:
- Transmembrane serine/threonine kinase forming with the TGF-beta type I serine/threonine kinase receptor, TGFBR1, the non-promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinogenesis. The formation of the receptor complex composed of 2 TGFBR1 and 2 TGFBR2 molecules symmetrically bound to the cytokine dimer results in the phosphorylation and the activation of TGFRB1 by the constitutively active TGFBR2. Activated TGFBR1 phosphorylates SMAD2 which dissociates from the receptor and interacts with SMAD4. The SMAD2-SMAD4 complex is subsequently translocated to the nucleus where it modulates the transcription of the TGF-beta-regulated genes. This constitutes the canonical SMAD-dependent TGF-beta signaling cascade. Also involved in non-canonical, SMAD-independent TGF-beta signaling pathways.
- Gene Name:
- TGFBR2
- Uniprot ID:
- P37173
- Molecular Weight:
- 64567.1 Da
References
- Overington JP, Al-Lazikani B, Hopkins AL: How many drug targets are there? Nat Rev Drug Discov. 2006 Dec;5(12):993-6. [17139284 ]