Basic Info

Common NamePyrocatechol(F05459)
2D Structure
Description

Pyrocatechol, often known as catechol or benzene-1,2-diol, is a benzenediol, with formula C6H4(OH)2. It was first prepared in 1839 by H. Reinsch by distilling catechin (the juice of Mimosa catechu). This colourless compound occurs naturally, but about 20000 tons are manufactured each year, mainly as precursors to pesticides, flavors, and fragrances. Its sulfonic acid is often present in the urine of many mammals. Small amounts of catechol occur naturally in fruits and vegetables, along with the enzyme polyphenol oxidase. Upon mixing the enzyme with the substrate and exposure to oxygen (as when a potato or apple is cut), the colorless catechol oxidizes to reddish-brown benzoquinone derivatives. The enzyme is inactivated by adding an acid, such as lemon juice, or by refrigeration. Excluding oxygen also prevents the browning reaction. Catechol melts at 28 oC and boils at 250 oC. It is employed in medicine as an expectorant. The dimethyl ether or veratrol is also used in medicine. Many other pyrocatechin derivatives have been suggested for therapeutic application.

FRCD IDF05459
CAS Number120-80-9
PubChem CID289
FormulaC6H6O2
IUPAC Name

benzene-1,2-diol

InChI Key

YCIMNLLNPGFGHC-UHFFFAOYSA-N

InChI

InChI=1S/C6H6O2/c7-5-3-1-2-4-6(5)8/h1-4,7-8H

Canonical SMILES

C1=CC=C(C(=C1)O)O

Isomeric SMILES

C1=CC=C(C(=C1)O)O

WikipediaPyrocatechol
Synonyms
        
            benzene-1,2-diol
        
            pyrocatechol
        
            catechol
        
            120-80-9
        
            1,2-dihydroxybenzene
        
            1,2-benzenediol
        
            pyrocatechin
        
            2-hydroxyphenol
        
            o-Benzenediol
        
            Pyrocatechine
        
Classifies
                

                  
                    Pollutant
                  
                    Pesticide
                  

                
        
Update DateNov 13, 2018 17:07

Chemical Taxonomy

KingdomOrganic compounds
SuperclassBenzenoids
ClassPhenols
SubclassBenzenediols
Intermediate Tree NodesNot available
Direct ParentCatechols
Alternative Parents
Molecular FrameworkAromatic homomonocyclic compounds
SubstituentsCatechol - 1-hydroxy-4-unsubstituted benzenoid - 1-hydroxy-2-unsubstituted benzenoid - Monocyclic benzene moiety - Organic oxygen compound - Hydrocarbon derivative - Organooxygen compound - Aromatic homomonocyclic compound
DescriptionThis compound belongs to the class of organic compounds known as catechols. These are compounds containing a 1,2-benzenediol moiety.

Properties

Property NameProperty Value
Molecular Weight110.112
Hydrogen Bond Donor Count2
Hydrogen Bond Acceptor Count2
Rotatable Bond Count0
Complexity62.9
Monoisotopic Mass110.037
Exact Mass110.037
XLogP0.9
Formal Charge0
Heavy Atom Count8
Defined Atom Stereocenter Count0
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count0
Isotope Atom Count0
Covalently-Bonded Unit Count1

ADMET

Model Result Probability
Absorption
Blood-Brain BarrierBBB+0.5000
Human Intestinal AbsorptionHIA+0.9782
Caco-2 PermeabilityCaco2+0.8824
P-glycoprotein SubstrateNon-substrate0.7207
P-glycoprotein InhibitorNon-inhibitor0.9705
Non-inhibitor0.9926
Renal Organic Cation TransporterNon-inhibitor0.9134
Distribution
Subcellular localizationMitochondria0.8082
Metabolism
CYP450 2C9 SubstrateNon-substrate0.8247
CYP450 2D6 SubstrateNon-substrate0.8574
CYP450 3A4 SubstrateNon-substrate0.7305
CYP450 1A2 InhibitorNon-inhibitor0.8949
CYP450 2C9 InhibitorNon-inhibitor0.9070
CYP450 2D6 InhibitorNon-inhibitor0.9579
CYP450 2C19 InhibitorNon-inhibitor0.9348
CYP450 3A4 InhibitorNon-inhibitor0.9570
CYP Inhibitory PromiscuityLow CYP Inhibitory Promiscuity0.7461
Excretion
Toxicity
Human Ether-a-go-go-Related Gene InhibitionWeak inhibitor0.9322
Non-inhibitor0.8953
AMES ToxicityNon AMES toxic0.6674
CarcinogensNon-carcinogens0.8689
Fish ToxicityHigh FHMT0.7424
Tetrahymena Pyriformis ToxicityHigh TPT0.9702
Honey Bee ToxicityHigh HBT0.6926
BiodegradationReady biodegradable0.6877
Acute Oral ToxicityII0.7741
Carcinogenicity (Three-class)Warning0.5621

Model Value Unit
Absorption
Aqueous solubility-0.0276LogS
Caco-2 Permeability1.1463LogPapp, cm/s
Distribution
Metabolism
Excretion
Toxicity
Rat Acute Toxicity2.5957LD50, mol/kg
Fish Toxicity1.0318pLC50, mg/L
Tetrahymena Pyriformis Toxicity0.6327pIGC50, ug/L

References

TitleJournalDatePubmed ID
Chromatographic fingerprinting through chemometric techniques for herbal slimming pills: A way of adulterant identification.Forensic Sci Int2018 May29602149
Influence of inherent hierarchical porous char with alkali and alkaline earthmetallic species on lignin pyrolysis.Bioresour Technol2018 Jul 2530092486
Phenolic root exudate and tissue compounds vary widely among temperate forest tree species and have contrasting effects on soil microbial respiration.New Phytol2018 Apr29473651
Molecular characterization and phylogenetic analysis of highly pathogenic Vibrio alginolyticus strains isolated during mortality outbreaks in cultured Ruditapesdecussatus juvenile.Microb Pathog2017 Oct28923608
Multiple metabolic pathways for metabolism of l-tryptophan in Fusarium graminearum.Can J Microbiol2017 Nov28926717
Antioxidant capacity of (+)-catechin visible-light photoirradiated in thepresence of vitamin B2.Redox Rep2017 Nov27712465
Phenolic compounds isolated from fermented blueberry juice decrease hepatocellular glucose output and enhance muscle glucose uptake in cultured murine and human cells.BMC Complement Altern Med2017 Mar 428259166
Bacteria Associated to Plants Naturally Selected in a Historical PCB PollutedSoil Show Potential to Sustain Natural Attenuation.Front Microbiol2017 Jul 2528790991
Efficacy of free and encapsulated Bacillus lichenformis strain SL10 on degradation of phenol: A comparative study of degradation kinetics.J Environ Manage2017 Jul 1528407600
Antioxidant and ion-induced gelation functions of pectins enabled by polyphenolconjugation.Int J Biol Macromol2017 Aug28366850
Antioxidant activity of commercial food grade tannins exemplified in a winemodel.Food Addit Contam Part A Chem Anal Control Expo Risk Assess2016Dec27696959
Nutrient retention and fate of iron-binding phenolic compounds during the injera processing of tannin-free and high-tannin sorghum.J Sci Food Agric2016 Mar 3025951136
Retaining Oxidative Stability of Emulsified Foods by Novel NonmigratoryPolyphenol Coated Active Packaging.J Agric Food Chem2016 Jul 1327310107
Evaluation of metal concentration and antioxidant, antimicrobial, and anticancer potentials of two edible mushrooms Lactarius deliciosus and Macrolepiota procera.J Food Drug Anal2016 Jul28911552
Efficient Binding of Heavy Metals by Black Sesame Pigment: Toward InnovativeDietary Strategies To Prevent Bioaccumulation.J Agric Food Chem2016 Feb 326752477
Effect of Selected Plant Phenolics on Fe2+-EDTA-H₂O₂ System Mediated Deoxyribose Oxidation: Molecular Structure-Derived Relationships of Anti- and Pro-OxidantActions.Molecules2016 Dec 3128042856
Iron binding efficiency of polyphenols: Comparison of effect of ascorbic acid andethylenediaminetetraacetic acid on catechol and galloyl groups.Food Chem2016 Apr 1526675868
Neuraminidase inhibition of Dietary chlorogenic acids and derivatives - potentialantivirals from dietary sources.Food Funct2016 Apr27010419
Dietary Catechols and their Relationship to Microbial Endocrinology.Adv Exp Med Biol201626589215
Platinum Nanoparticles: Efficient and Stable Catechol Oxidase Mimetics.ACS Appl Mater Interfaces2015 Sep 926305170

Targets

General Function:
Zinc ion binding
Specific Function:
Nuclear receptor that binds DNA as a monomer to ROR response elements (RORE) containing a single core motif half-site 5'-AGGTCA-3' preceded by a short A-T-rich sequence. Key regulator of cellular differentiation, immunity, peripheral circadian rhythm as well as lipid, steroid, xenobiotics and glucose metabolism. Considered to have intrinsic transcriptional activity, have some natural ligands like oxysterols that act as agonists (25-hydroxycholesterol) or inverse agonists (7-oxygenated sterols), enhancing or repressing the transcriptional activity, respectively. Recruits distinct combinations of cofactors to target gene regulatory regions to modulate their transcriptional expression, depending on the tissue, time and promoter contexts. Regulates the circadian expression of clock genes such as CRY1, ARNTL/BMAL1 and NR1D1 in peripheral tissues and in a tissue-selective manner. Competes with NR1D1 for binding to their shared DNA response element on some clock genes such as ARNTL/BMAL1, CRY1 and NR1D1 itself, resulting in NR1D1-mediated repression or RORC-mediated activation of the expression, leading to the circadian pattern of clock genes expression. Therefore influences the period length and stability of the clock. Involved in the regulation of the rhythmic expression of genes involved in glucose and lipid metabolism, including PLIN2 and AVPR1A. Negative regulator of adipocyte differentiation through the regulation of early phase genes expression, such as MMP3. Controls adipogenesis as well as adipocyte size and modulates insulin sensitivity in obesity. In liver, has specific and redundant functions with RORA as positive or negative modulator of expression of genes encoding phase I and Phase II proteins involved in the metabolism of lipids, steroids and xenobiotics, such as SULT1E1. Also plays also a role in the regulation of hepatocyte glucose metabolism through the regulation of G6PC and PCK1. Regulates the rhythmic expression of PROX1 and promotes its nuclear localization (By similarity). Plays an indispensable role in the induction of IFN-gamma dependent anti-mycobacterial systemic immunity (PubMed:26160376).Isoform 2: Essential for thymopoiesis and the development of several secondary lymphoid tissues, including lymph nodes and Peyer's patches. Required for the generation of LTi (lymphoid tissue inducer) cells. Regulates thymocyte survival through DNA-binding on ROREs of target gene promoter regions and recruitment of coactivaros via the AF-2. Also plays a key role, downstream of IL6 and TGFB and synergistically with RORA, for lineage specification of uncommitted CD4(+) T-helper (T(H)) cells into T(H)17 cells, antagonizing the T(H)1 program. Probably regulates IL17 and IL17F expression on T(H) by binding to the essential enhancer conserved non-coding sequence 2 (CNS2) in the IL17-IL17F locus. May also play a role in the pre-TCR activation cascade leading to the maturation of alpha/beta T-cells and may participate in the regulation of DNA accessibility in the TCR-J(alpha) locus.
Gene Name:
RORC
Uniprot ID:
P51449
Molecular Weight:
58194.845 Da
References
  1. Sipes NS, Martin MT, Kothiya P, Reif DM, Judson RS, Richard AM, Houck KA, Dix DJ, Kavlock RJ, Knudsen TB: Profiling 976 ToxCast chemicals across 331 enzymatic and receptor signaling assays. Chem Res Toxicol. 2013 Jun 17;26(6):878-95. doi: 10.1021/tx400021f. Epub 2013 May 16. [23611293 ]