Coumarin
(right click,save link as to download,it is a temp file,please download as soon as possible, you can also use CTRL+S to save the whole html page)
Basic Info
Common Name | Coumarin(F05572) |
2D Structure | |
Description | Coumarin is a chemical compound/poison found in many plants, notably in high concentration in the tonka bean, woodruff, and bison grass. It has a sweet scent, readily recognised as the scent of newly-mown hay. It has clinical value as the precursor for several anticoagulants, notably warfarin. --Wikipedia. Coumarins, as a class, are comprised of numerous naturally occurring benzo-alpha-pyrone compounds with important and diverse physiological activities. The parent compound, coumarin, occurs naturally in many plants, natural spices, and foods such as tonka bean, cassia (bastard cinnamon or Chinese cinnamon), cinnamon, melilot (sweet clover), green tea, peppermint, celery, bilberry, lavender, honey (derived both from sweet clover and lavender), and carrots, as well as in beer, tobacco, wine, and other foodstuffs. Coumarin concentrations in these plants, spices, and foods range from <1 mg/kg in celery, 7000 mg/kg in cinnamon, and up to 87,000 mg/kg in cassia. An estimate of human exposure to coumarin from the diet has been calculated to be 0.02 mg/kg/day. Coumarin is used as an additive in perfumes and fragranced consumer products at concentrations ranging from <0.5% to 6.4% in fine fragrances to <0.01% in detergents. An estimate for systemic exposure of humans from the use of fragranced cosmetic products is 0.04 mg/kg BW/day, assuming complete dermal penetration. The use of coumarin as a food additive was banned by the FDA in 1954 based on reports of hepatotoxicity in rats. Due to its potential hepatotoxic effects in humans, the European Commission restricted coumarin from naturals as a direct food additive to 2 mg/kg food/day, with exceptions granting higher levels for alcoholic beverages, caramel, chewing gum, and certain 'traditional foods'. In addition to human exposure to coumarin from dietary sources and consumer products, coumarin is also used clinically as an antineoplastic and for the treatment of lymphedema and venous insufficiency. Exposure ranges from 11 mg/day for consumption of natural food ingredients to 7 g/day following clinical administration. Although adverse effects in humans following coumarin exposure are rare, and only associated with clinical doses, recent evidence indicates coumarin causes liver tumors in rats and mice and Clara cell toxicity and lung tumors in mice. The multiple effects as well as the ongoing human exposure to coumarin have resulted in a significant research effort focused on understanding the mechanism of coumarin induced toxicity/carcinogenicity and its human relevance. These investigations have revealed significant species differences in coumarin metabolism and toxicity such that the mechanism of coumarin induced effects in rodents, and the relevance of these findings for the safety assessment of coumarin exposure in humans are now better understood. In October 2004, the European Food Safety Authority (EFSA, 2004) reviewed coumarin to establish a tolerable daily intake (TDI) in foods. EFSA issued an opinion indicating that coumarin is not genotoxic, and that a threshold approach to safety assessment was most appropriate. EFSA recommended a TDI of 0 to 0.1 mg/kg BW/day. Including dietary contributions, the total human exposure is estimated to be 0.06 mg/kg/day. As a pharmaceutical, coumarin has been used in diverse applications with a wide variety of dosing regimens. Unlike coumadin and other coumarin derivatives, coumarin has no anti-coagulant activity. However, at low doses (typically 7 to 10 mg/day), coumarin has been used as a 'venotonic' to promote vein health and small venule blood flow. Additionally, coumarin has been used clinically in the treatment of high-protein lymphedema of various etiologies. (A7913). |
FRCD ID | F05572 |
CAS Number | 91-64-5 |
PubChem CID | 323 |
Formula | C9H6O2 |
IUPAC Name | chromen-2-one |
InChI Key | ZYGHJZDHTFUPRJ-UHFFFAOYSA-N |
InChI | InChI=1S/C9H6O2/c10-9-6-5-7-3-1-2-4-8(7)11-9/h1-6H |
Canonical SMILES | C1=CC=C2C(=C1)C=CC(=O)O2 |
Isomeric SMILES | C1=CC=C2C(=C1)C=CC(=O)O2 |
Wikipedia | Coumarin |
Synonyms | 1,2-Benzopyrone chromen-2-one coumarin 2H-Chromen-2-one 91-64-5 2H-1-Benzopyran-2-one cumarin Rattex Tonka bean camphor Coumarinic anhydride |
Classifies | Plant Toxin |
Update Date | Nov 13, 2018 17:07 |
Chemical Taxonomy
Kingdom | Organic compounds |
Superclass | Phenylpropanoids and polyketides |
Class | Coumarins and derivatives |
Subclass | Not available |
Intermediate Tree Nodes | Not available |
Direct Parent | Coumarins and derivatives |
Alternative Parents | |
Molecular Framework | Aromatic heteropolycyclic compounds |
Substituents | Coumarin - 1-benzopyran - Benzopyran - Pyranone - Benzenoid - Pyran - Heteroaromatic compound - Lactone - Oxacycle - Organoheterocyclic compound - Organic oxygen compound - Organic oxide - Hydrocarbon derivative - Organooxygen compound - Aromatic heteropolycyclic compound |
Description | This compound belongs to the class of organic compounds known as coumarins and derivatives. These are polycyclic aromatic compounds containing a 1-benzopyran moiety with a ketone group at the C2 carbon atom (1-benzopyran-2-one). |
Properties
Property Name | Property Value |
---|---|
Molecular Weight | 146.145 |
Hydrogen Bond Donor Count | 0 |
Hydrogen Bond Acceptor Count | 2 |
Rotatable Bond Count | 0 |
Complexity | 196 |
Monoisotopic Mass | 146.037 |
Exact Mass | 146.037 |
XLogP | 1.4 |
Formal Charge | 0 |
Heavy Atom Count | 11 |
Defined Atom Stereocenter Count | 0 |
Undefined Atom Stereocenter Count | 0 |
Defined Bond Stereocenter Count | 0 |
Undefined Bond Stereocenter Count | 0 |
Isotope Atom Count | 0 |
Covalently-Bonded Unit Count | 1 |
ADMET
Model | Result | Probability |
---|---|---|
Absorption | ||
Blood-Brain Barrier | BBB+ | 0.9565 |
Human Intestinal Absorption | HIA+ | 0.9912 |
Caco-2 Permeability | Caco2+ | 0.9155 |
P-glycoprotein Substrate | Non-substrate | 0.6697 |
P-glycoprotein Inhibitor | Non-inhibitor | 0.8540 |
Non-inhibitor | 0.8663 | |
Renal Organic Cation Transporter | Non-inhibitor | 0.8301 |
Distribution | ||
Subcellular localization | Mitochondria | 0.4995 |
Metabolism | ||
CYP450 2C9 Substrate | Non-substrate | 0.7966 |
CYP450 2D6 Substrate | Non-substrate | 0.9117 |
CYP450 3A4 Substrate | Non-substrate | 0.7139 |
CYP450 1A2 Inhibitor | Inhibitor | 0.9117 |
CYP450 2C9 Inhibitor | Non-inhibitor | 0.6943 |
CYP450 2D6 Inhibitor | Non-inhibitor | 0.9105 |
CYP450 2C19 Inhibitor | Non-inhibitor | 0.5000 |
CYP450 3A4 Inhibitor | Non-inhibitor | 0.8310 |
CYP Inhibitory Promiscuity | Low CYP Inhibitory Promiscuity | 0.8115 |
Excretion | ||
Toxicity | ||
Human Ether-a-go-go-Related Gene Inhibition | Weak inhibitor | 0.8702 |
Non-inhibitor | 0.9474 | |
AMES Toxicity | Non AMES toxic | 0.8870 |
Carcinogens | Non-carcinogens | 0.9412 |
Fish Toxicity | High FHMT | 0.6109 |
Tetrahymena Pyriformis Toxicity | High TPT | 0.9544 |
Honey Bee Toxicity | High HBT | 0.8062 |
Biodegradation | Ready biodegradable | 0.5884 |
Acute Oral Toxicity | II | 0.7019 |
Carcinogenicity (Three-class) | Warning | 0.5324 |
Model | Value | Unit |
---|---|---|
Absorption | ||
Aqueous solubility | -2.7525 | LogS |
Caco-2 Permeability | 1.7653 | LogPapp, cm/s |
Distribution | ||
Metabolism | ||
Excretion | ||
Toxicity | ||
Rat Acute Toxicity | 2.4622 | LD50, mol/kg |
Fish Toxicity | 1.2095 | pLC50, mg/L |
Tetrahymena Pyriformis Toxicity | 0.6735 | pIGC50, ug/L |
References
Title | Journal | Date | Pubmed ID |
---|---|---|---|
Hepatoprotection of auraptene from peels of citrus fruits against thioacetamide-induced hepatic fibrosis in mice by activating farnesoid X receptor. | Food Funct | 2018 May 23 | 29721568 |
Pharmacological and Nutritional Effects of Natural Coumarins and Their Structure-Activity Relationships. | Mol Nutr Food Res | 2018 May 11 | 29750855 |
Coumarin: a novel player in microbial quorum sensing and biofilm formationinhibition. | Appl Microbiol Biotechnol | 2018 Mar | 29392389 |
Detoxification of aflatoxins on prospective approach: effect on structural, mechanical, and optical properties under pressures. | Interdiscip Sci | 2018 Jun | 29282626 |
Biological Degradation of Aflatoxin B₁ by Cell-Free Extracts of Bacillus velezensis DY3108 with Broad PH Stability and Excellent Thermostability. | Toxins (Basel) | 2018 Aug 14 | 30110983 |
Evaluation of Aculeatin and Toddaculin Isolated from Toddalia asiatica as Anti-inflammatory Agents in LPS-Stimulated RAW264 Macrophages. | Biol Pharm Bull | 2018 | 29311475 |
Vertical Leaching of Allelochemicals Affecting Their Bioactivity and theMicrobial Community of Soil. | J Agric Food Chem | 2017 Sep 13 | 28800227 |
The paralytic shellfish toxin, saxitoxin, enters the cytoplasm and induces apoptosis of oyster immune cells through a caspase-dependent pathway. | Aquat Toxicol | 2017 Sep | 28711010 |
New Prenylated ortho-Dihydroxycoumarins from the Fruits of Ficus nipponica. | Chem Biodivers | 2017 Sep | 28574644 |
Identification of Two Cytochrome Monooxygenase P450 Genes, CYP321A7 and CYP321A9, from the Tobacco Cutworm Moth (Spodoptera Litura) and Their Expression in Response to Plant Allelochemicals. | Int J Mol Sci | 2017 Oct 30 | 29084173 |
Toxicity of coumarins synthesized by Pechmann-Duisberg condensation againstDrosophila melanogaster larvae and antibacterial effects. | Food Chem Toxicol | 2017 Nov | 28576470 |
Antifungal and antiaflatoxigenic activities of coumarinyl thiosemicarbazides against Aspergillus flavus NRRL 3251. | Arh Hig Rada Toksikol | 2017 Mar 1 | 28365677 |
Pathological and biochemical evaluation of coumarin and chlorophyllin against aflatoxicosis in rat. | Exp Toxicol Pathol | 2017 Jun 14 | 28190563 |
The Activity of the Antioxidant Defense System of the Weed Species Senna obtusifolia L. and its Resistance to Allelochemical Stress. | J Chem Ecol | 2017 Jul | 28711978 |
Hydrogen peroxide-dependent antibacterial action of Melilotus albus honey. | Lett Appl Microbiol | 2017 Jul | 28426165 |
Toxicity of Plant Secondary Metabolites Modulating Detoxification Genes Expression for Natural Red Palm Weevil Pesticide Development. | Molecules | 2017 Jan 20 | 28117698 |
Umbelliferone reverses depression-like behavior in chronic unpredictable mildstress-induced rats by attenuating neuronal apoptosis via regulating ROCK/Aktpathway. | Behav Brain Res | 2017 Jan 15 | 27646771 |
4-Hydroxy-7-methyl-3-phenylcoumarin Suppresses Aflatoxin Biosynthesis via Downregulation of aflK Expressing Versicolorin B Synthase in Aspergillus flavus. | Molecules | 2017 Apr 29 | 28468270 |
Inhibition of Hafnia alvei H4 Biofilm Formation by the Food AdditiveDihydrocoumarin. | J Food Prot | 2017 Apr 12:842-847 | 28402186 |
New routes for plant iron mining. | New Phytol | 2017 Apr | 27918629 |
Targets
- General Function:
- Steroid hydroxylase activity
- Specific Function:
- Exhibits a high coumarin 7-hydroxylase activity. Can act in the hydroxylation of the anti-cancer drugs cyclophosphamide and ifosphamide. Competent in the metabolic activation of aflatoxin B1. Constitutes the major nicotine C-oxidase. Acts as a 1,4-cineole 2-exo-monooxygenase. Possesses low phenacetin O-deethylation activity.
- Gene Name:
- CYP2A6
- Uniprot ID:
- P11509
- Molecular Weight:
- 56501.005 Da
- General Function:
- Zinc ion binding
- Specific Function:
- Nuclear hormone receptor. The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. Ligand-dependent nuclear transactivation involves either direct homodimer binding to a palindromic estrogen response element (ERE) sequence or association with other DNA-binding transcription factors, such as AP-1/c-Jun, c-Fos, ATF-2, Sp1 and Sp3, to mediate ERE-independent signaling. Ligand binding induces a conformational change allowing subsequent or combinatorial association with multiprotein coactivator complexes through LXXLL motifs of their respective components. Mutual transrepression occurs between the estrogen receptor (ER) and NF-kappa-B in a cell-type specific manner. Decreases NF-kappa-B DNA-binding activity and inhibits NF-kappa-B-mediated transcription from the IL6 promoter and displace RELA/p65 and associated coregulators from the promoter. Recruited to the NF-kappa-B response element of the CCL2 and IL8 promoters and can displace CREBBP. Present with NF-kappa-B components RELA/p65 and NFKB1/p50 on ERE sequences. Can also act synergistically with NF-kappa-B to activate transcription involving respective recruitment adjacent response elements; the function involves CREBBP. Can activate the transcriptional activity of TFF1. Also mediates membrane-initiated estrogen signaling involving various kinase cascades. Isoform 3 is involved in activation of NOS3 and endothelial nitric oxide production. Isoforms lacking one or several functional domains are thought to modulate transcriptional activity by competitive ligand or DNA binding and/or heterodimerization with the full length receptor. Essential for MTA1-mediated transcriptional regulation of BRCA1 and BCAS3. Isoform 3 can bind to ERE and inhibit isoform 1.
- Gene Name:
- ESR1
- Uniprot ID:
- P03372
- Molecular Weight:
- 66215.45 Da
References
- Sipes NS, Martin MT, Kothiya P, Reif DM, Judson RS, Richard AM, Houck KA, Dix DJ, Kavlock RJ, Knudsen TB: Profiling 976 ToxCast chemicals across 331 enzymatic and receptor signaling assays. Chem Res Toxicol. 2013 Jun 17;26(6):878-95. doi: 10.1021/tx400021f. Epub 2013 May 16. [23611293 ]