EC Tree |
1. Oxidoreductases |
1.1 Acting on the CH-OH group of donors |
1.1.1 With NAD+ or NADP+ as acceptor |
ID: | 1.1.1.282 |
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Description: | Quinate/shikimate dehydrogenase. |
Alternative Name: |
Quinic dehydrogenase. Quinate dehydrogenase. |
Cath: | 3.40.50.720; 3.40.50.10860; |
Click one PDB to see exact 3D structure provided by NGL.
Note: Use your mouse to drag, rotate, and zoom in and out of the structure. Mouse-over to identify atoms and bonds. Mouse controls documentation.UniProtKB Enzyme Link: | UniProtKB 1.1.1.282 |
BRENDA Enzyme Link: | BRENDA 1.1.1.282 |
KEGG Enzyme Link: | KEGG1.1.1.282 |
BioCyc Enzyme Link: | BioCyc 1.1.1.282 |
ExPASy Enzyme Link: | ExPASy1.1.1.282 |
EC2PDB Enzyme Link: | EC2PDB 1.1.1.282 |
ExplorEnz Enzyme Link: | ExplorEnz 1.1.1.282 |
PRIAM enzyme-specific profiles Link: | PRIAM 1.1.1.282 |
IntEnz Enzyme Link: | IntEnz 1.1.1.282 |
MEDLINE Enzyme Link: | MEDLINE 1.1.1.282 |
MSA: | |
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Phylogenetic Tree: | |
Uniprot: | |
M-CSA: |
RHEA:17737 | NADP(+) + shikimate = 3-dehydroshikimate + H(+) + NADPH |
RULE(radius=1) | [*:1]-[CH;+0:2](-[*:3])-[OH;+0:4].[*:5]-[n+;H0:6]1:[cH;+0:7]:[cH;+0:8]:[cH;+0:9]:[c;H0;+0:10](-[*:11]):[cH;+0:12]:1>>[*:1]-[C;H0;+0:2](-[*:3])=[O;H0;+0:4].[*:5]-[N;H0;+0:6]1-[CH;+0:7]=[CH;+0:8]-[CH2;+0:9]-[C;H0;+0:10](-[*:11])=[CH;+0:12]-1 |
Reaction | ![]() |
Core-to-Core | |
Core-to-Core |
Title | Authors | Date | PubMed ID |
---|---|---|---|
The conserved Lysine69 residue plays a catalytic role in Mycobacterium tuberculosis shikimate dehydrogenase. | Rodrigues VS Jr, Breda A, Santos DS, Basso LA | 2009 Nov 16 | 19917104 |
Structural and biochemical analyses of shikimate dehydrogenase AroE from Aquifex aeolicus: implications for the catalytic mechanism. | Gan J, Wu Y, Prabakaran P, Gu Y, Li Y, Andrykovitch M, Liu H, Gong Y, Yan H, Ji X | 2007 Aug 21 | 17649975 |
Kinetic and chemical mechanisms of shikimate dehydrogenase from Mycobacterium tuberculosis. | Fonseca IO, Silva RG, Fernandes CL, de Souza ON, Basso LA, Santos DS | 2007 Jan 15 | 17178095 |
Structure of Arabidopsis dehydroquinate dehydratase-shikimate dehydrogenase and implications for metabolic channeling in the shikimate pathway. | Singh SA, Christendat D | 2006 Jun 27 | 16784230 |
Crystal structure of a novel shikimate dehydrogenase from Haemophilus influenzae. | Singh S, Korolev S, Koroleva O, Zarembinski T, Collart F, Joachimiak A, Christendat D | 2005 Apr 29 | 15735308 |
Site-directed mutagenesis of the active site region in the quinate/shikimate 5-dehydrogenase YdiB of Escherichia coli. | Lindner HA, Nadeau G, Matte A, Michel G, Ménard R, Cygler M | 2005 Feb 25 | 15596430 |
The crystal structure of shikimate dehydrogenase (AroE) reveals a unique NADPH binding mode. | Ye S, Von Delft F, Brooun A, Knuth MW, Swanson RV, McRee DE | 2003 Jul | 12837789 |
Structures of shikimate dehydrogenase AroE and its Paralog YdiB. A common structural framework for different activities. | Michel G, Roszak AW, Sauvé V, Maclean J, Matte A, Coggins JR, Cygler M, Lapthorn AJ | 2003 May 23 | 12637497 |
The 2.3-A crystal structure of the shikimate 5-dehydrogenase orthologue YdiB from Escherichia coli suggests a novel catalytic environment for an NAD-dependent dehydrogenase. | Benach J, Lee I, Edstrom W, Kuzin AP, Chiang Y, Acton TB, Montelione GT, Hunt JF | 2003 May 23 | 12624088 |
RHEA:17741 | NAD(+) + shikimate = 3-dehydroshikimate + H(+) + NADH |
RULE(radius=1) | [*:1]-[CH;+0:2](-[*:3])-[OH;+0:4].[*:5]-[n+;H0:6]1:[cH;+0:7]:[cH;+0:8]:[cH;+0:9]:[c;H0;+0:10](-[*:11]):[cH;+0:12]:1>>[*:1]-[C;H0;+0:2](-[*:3])=[O;H0;+0:4].[*:5]-[N;H0;+0:6]1-[CH;+0:7]=[CH;+0:8]-[CH2;+0:9]-[C;H0;+0:10](-[*:11])=[CH;+0:12]-1 |
Reaction | ![]() |
Core-to-Core | |
Core-to-Core |
Title | Authors | Date | PubMed ID |
---|---|---|---|
Enzyme-substrate complexes of the quinate/shikimate dehydrogenase from Corynebacterium glutamicum enable new insights in substrate and cofactor binding, specificity, and discrimination. | Höppner A, Schomburg D, Niefind K | 2013 Nov | 23929881 |
1.6 angstroms structure of an NAD+-dependent quinate dehydrogenase from Corynebacterium glutamicum. | Schoepe J, Niefind K, Schomburg D | 2008 Jul | 18566515 |
Site-directed mutagenesis of the active site region in the quinate/shikimate 5-dehydrogenase YdiB of Escherichia coli. | Lindner HA, Nadeau G, Matte A, Michel G, Ménard R, Cygler M | 2005 Feb 25 | 15596430 |
Structures of shikimate dehydrogenase AroE and its Paralog YdiB. A common structural framework for different activities. | Michel G, Roszak AW, Sauvé V, Maclean J, Matte A, Coggins JR, Cygler M, Lapthorn AJ | 2003 May 23 | 12637497 |
The 2.3-A crystal structure of the shikimate 5-dehydrogenase orthologue YdiB from Escherichia coli suggests a novel catalytic environment for an NAD-dependent dehydrogenase. | Benach J, Lee I, Edstrom W, Kuzin AP, Chiang Y, Acton TB, Montelione GT, Hunt JF | 2003 May 23 | 12624088 |
RHEA:18425 | L-quinate + NADP(+) = 3-dehydroquinate + H(+) + NADPH |
RULE(radius=1) | [*:1]-[CH;+0:2](-[*:3])-[OH;+0:4].[*:5]-[n+;H0:6]1:[cH;+0:7]:[cH;+0:8]:[cH;+0:9]:[c;H0;+0:10](-[*:11]):[cH;+0:12]:1>>[*:1]-[C;H0;+0:2](-[*:3])=[O;H0;+0:4].[*:5]-[N;H0;+0:6]1-[CH;+0:7]=[CH;+0:8]-[CH2;+0:9]-[C;H0;+0:10](-[*:11])=[CH;+0:12]-1 |
Reaction | ![]() |
Core-to-Core | |
Core-to-Core |
Title | Authors | Date | PubMed ID |
---|---|---|---|
Site-directed mutagenesis of the active site region in the quinate/shikimate 5-dehydrogenase YdiB of Escherichia coli. | Lindner HA, Nadeau G, Matte A, Michel G, Ménard R, Cygler M | 2005 Feb 25 | 15596430 |
Structures of shikimate dehydrogenase AroE and its Paralog YdiB. A common structural framework for different activities. | Michel G, Roszak AW, Sauvé V, Maclean J, Matte A, Coggins JR, Cygler M, Lapthorn AJ | 2003 May 23 | 12637497 |
RHEA:22364 | L-quinate + NAD(+) = 3-dehydroquinate + H(+) + NADH |
RULE(radius=1) | [*:1]-[CH;+0:2](-[*:3])-[OH;+0:4].[*:5]-[n+;H0:6]1:[cH;+0:7]:[cH;+0:8]:[cH;+0:9]:[c;H0;+0:10](-[*:11]):[cH;+0:12]:1>>[*:1]-[C;H0;+0:2](-[*:3])=[O;H0;+0:4].[*:5]-[N;H0;+0:6]1-[CH;+0:7]=[CH;+0:8]-[CH2;+0:9]-[C;H0;+0:10](-[*:11])=[CH;+0:12]-1 |
Reaction | ![]() |
Core-to-Core | |
Core-to-Core |
Title | Authors | Date | PubMed ID |
---|---|---|---|
Enzyme-substrate complexes of the quinate/shikimate dehydrogenase from Corynebacterium glutamicum enable new insights in substrate and cofactor binding, specificity, and discrimination. | Höppner A, Schomburg D, Niefind K | 2013 Nov | 23929881 |
1.6 angstroms structure of an NAD+-dependent quinate dehydrogenase from Corynebacterium glutamicum. | Schoepe J, Niefind K, Schomburg D | 2008 Jul | 18566515 |
Site-directed mutagenesis of the active site region in the quinate/shikimate 5-dehydrogenase YdiB of Escherichia coli. | Lindner HA, Nadeau G, Matte A, Michel G, Ménard R, Cygler M | 2005 Feb 25 | 15596430 |
Structures of shikimate dehydrogenase AroE and its Paralog YdiB. A common structural framework for different activities. | Michel G, Roszak AW, Sauvé V, Maclean J, Matte A, Coggins JR, Cygler M, Lapthorn AJ | 2003 May 23 | 12637497 |