Enzyme

Download
EC Tree
     1. Oxidoreductases
        1.1 Acting on the CH-OH group of donors
            1.1.1 With NAD+ or NADP+ as acceptor
ID:1.1.1.44
Description:Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating).
Alternative Name: Phosphogluconic acid dehydrogenase.
6PGD.
6-phosphogluconic dehydrogenase.
6-phosphogluconic carboxylase.
Prosite: PDOC00390;
PDB:
PDBScop
1PGJ 8058535; 8058536; 8058535; 8058536;
2PGD 8001111; 8017573;
1PGQ 8001111; 8017573;
1PGP 8001111; 8017573;
1PGO 8001111; 8017573;
 » show all

Cath: 1.10.1040.10; 1.20.5.320; 3.40.50.720;

3D structure

Click one PDB to see exact 3D structure provided by NGL.

Note: Use your mouse to drag, rotate, and zoom in and out of the structure. Mouse-over to identify atoms and bonds. Mouse controls documentation.

References

External Links

UniProtKB Enzyme Link: UniProtKB 1.1.1.44
BRENDA Enzyme Link: BRENDA 1.1.1.44
KEGG Enzyme Link: KEGG1.1.1.44
BioCyc Enzyme Link: BioCyc 1.1.1.44
ExPASy Enzyme Link: ExPASy1.1.1.44
EC2PDB Enzyme Link: EC2PDB 1.1.1.44
ExplorEnz Enzyme Link: ExplorEnz 1.1.1.44
PRIAM enzyme-specific profiles Link: PRIAM 1.1.1.44
IntEnz Enzyme Link: IntEnz 1.1.1.44
MEDLINE Enzyme Link: MEDLINE 1.1.1.44
MSA:

1.1.1.44;

Phylogenetic Tree:

1.1.1.44;

Uniprot:
M-CSA:
RHEA:10116 6-phospho-D-gluconate + NADP(+) = CO2 + D-ribulose 5-phosphate + NADPH
RULE(radius=1) [*:1]-[n+;H0:2]1:[cH;+0:3]:[cH;+0:4]:[cH;+0:5]:[c;H0;+0:6](-[*:7]):[cH;+0:8]:1.[*:9]=[C;H0;+0:10](-[OH;+0:11])-[CH;+0:12](-[*:13])-[CH;+0:14](-[*:15])-[OH;+0:16]>>[*:13]-[CH2;+0:12]-[C;H0;+0:14](-[*:15])=[O;H0;+0:16].[*:1]-[N;H0;+0:2]1-[CH;+0:3]=[CH;+0:4]-[CH2;+0:5]-[C;H0;+0:6](-[*:7])=[CH;+0:8]-1.[*:9]=[C;H0;+0:10]=[O;H0;+0:11]
Reaction
Core-to-Core More

References

TitleAuthorsDatePubMed ID
The gnd gene encoding a novel 6-phosphogluconate dehydrogenase and its adjacent region of Actinobacillus actinomycetemcomitans chromosomal DNA.Yoshida Y, Nakano Y, Yamashita Y, Koga T1997 Jan 39020051
Purification and properties of glucose-6-phosphate dehydrogenase (NADP+/NAD+) and 6-phosphogluconate dehydrogenase (NADP+/NAD+) from methanol-grown Pseudomonas C.Ben-Bassat A, Goldberg I1980 Jan 117350909
6-phospho-D-gluconate dehydrogenase from Pseudomonas fluorescens. Properties and subunit structure.Stournaras C, Maurer P, Kurz G1983 Feb 16402366
Kinetic studies of Haemophilus influenzae 6-phosphogluconate dehydrogenase.Yoon H, Anderson CD, Anderson BM1989 Jan 192783298
Conformational changes associated with cofactor/substrate binding of 6-phosphogluconate dehydrogenase from Escherichia coli and Klebsiella pneumoniae: Implications for enzyme mechanism.Chen YY, Ko TP, Chen WH, Lo LP, Lin CH, Wang AH2010 Jan19686854
Crystal structure of Saccharomyces cerevisiae 6-phosphogluconate dehydrogenase Gnd1.He W, Wang Y, Liu W, Zhou CZ2007 Jun 1417570834
The Bacillus subtilis yqjI gene encodes the NADP+-dependent 6-P-gluconate dehydrogenase in the pentose phosphate pathway.Zamboni N, Fischer E, Laudert D, Aymerich S, Hohmann HP, Sauer U2004 Jul15231785
Identification of an arginine residue in the dual coenzyme-specific glucose-6-phosphate dehydrogenase from Leuconostoc mesenteroides that plays a key role in binding NADP+ but not NAD+.Levy HR, Vought VE, Yin X, Adams MJ1996 Feb 18579362