| EC Tree |
| 1. Oxidoreductases |
| 1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen |
| 1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor |
| ID: | 1.14.11.27 |
|---|---|
| Description: | [Histone H3]-dimetyl-L-lysine-36 demethylase. |
| Alternative Name: |
JmjC domain-containing histone demethylase 1A. JHDM1A. Histone-lysine (H3-K36) demethylase. Histone demethylase. H3-K36-specific demethylase. |
| Cath: | 1.10.10.1500; 1.10.10.1520; 3.20.20.60; 3.30.40.10; 1.20.58.1360; 1.20.58.2210; 2.60.120.650; |
Click one PDB to see exact 3D structure provided by NGL.
Note: Use your mouse to drag, rotate, and zoom in and out of the structure. Mouse-over to identify atoms and bonds. Mouse controls documentation.| UniProtKB Enzyme Link: | UniProtKB 1.14.11.27 |
| BRENDA Enzyme Link: | BRENDA 1.14.11.27 |
| KEGG Enzyme Link: | KEGG1.14.11.27 |
| BioCyc Enzyme Link: | BioCyc 1.14.11.27 |
| ExPASy Enzyme Link: | ExPASy1.14.11.27 |
| EC2PDB Enzyme Link: | EC2PDB 1.14.11.27 |
| ExplorEnz Enzyme Link: | ExplorEnz 1.14.11.27 |
| PRIAM enzyme-specific profiles Link: | PRIAM 1.14.11.27 |
| IntEnz Enzyme Link: | IntEnz 1.14.11.27 |
| MEDLINE Enzyme Link: | MEDLINE 1.14.11.27 |
| MSA: | |
|---|---|
| Phylogenetic Tree: | |
| Uniprot: | |
| M-CSA: |
| RHEA:42032 | 2 2-oxoglutarate + N(6),N(6)-dimethyl-L-lysine(36)-[histone H3] + 2 O2 = 2 CO2 + 2 formaldehyde + L-lysine(36)-[histone H3] + 2 succinate |
| RULE(radius=1) | [*:1]-[N;H0;+0:2](-[CH3;+0:3])-[CH3;+0:4].[*:5]=[C;H0;+0:6](-[OH;+0:7])-[C;H0;+0:8](=[*:9])-[*:10].[*:11]=[C;H0;+0:12](-[OH;+0:13])-[C;H0;+0:14](=[*:15])-[*:16].[O;H0;+0:17]=[O;H0;+0:18].[O;H0;+0:19]=[O;H0;+0:20]>>[*:1]-[NH2;+0:2].[*:9]=[C;H0;+0:8](-[*:10])-[OH;+0:17].[*:15]=[C;H0;+0:14](-[*:16])-[OH;+0:18].[*:5]=[C;H0;+0:6]=[O;H0;+0:7].[*:11]=[C;H0;+0:12]=[O;H0;+0:13].[CH2;+0:3]=[O;H0;+0:19].[CH2;+0:4]=[O;H0;+0:20] |
| Reaction | ![]() |
| Core-to-Core | No scaffolds atoms were exchanged as a result of the reaction |
| Title | Authors | Date | PubMed ID |
|---|---|---|---|
| Histone demethylation by a family of JmjC domain-containing proteins. | Tsukada Y, Fang J, Erdjument-Bromage H, Warren ME, Borchers CH, Tempst P, Zhang Y | 2006 Feb 16 | 16362057 |