EC Tree |
1. Oxidoreductases |
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen |
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor |
ID: | 1.14.11.27 |
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Description: | [Histone H3]-dimetyl-L-lysine-36 demethylase. |
Alternative Name: |
JmjC domain-containing histone demethylase 1A. JHDM1A. Histone-lysine (H3-K36) demethylase. Histone demethylase. H3-K36-specific demethylase. |
Cath: | 1.10.10.1500; 1.10.10.1520; 3.20.20.60; 3.30.40.10; 1.20.58.1360; 1.20.58.2210; 2.60.120.650; |
Click one PDB to see exact 3D structure provided by NGL.
Note: Use your mouse to drag, rotate, and zoom in and out of the structure. Mouse-over to identify atoms and bonds. Mouse controls documentation.UniProtKB Enzyme Link: | UniProtKB 1.14.11.27 |
BRENDA Enzyme Link: | BRENDA 1.14.11.27 |
KEGG Enzyme Link: | KEGG1.14.11.27 |
BioCyc Enzyme Link: | BioCyc 1.14.11.27 |
ExPASy Enzyme Link: | ExPASy1.14.11.27 |
EC2PDB Enzyme Link: | EC2PDB 1.14.11.27 |
ExplorEnz Enzyme Link: | ExplorEnz 1.14.11.27 |
PRIAM enzyme-specific profiles Link: | PRIAM 1.14.11.27 |
IntEnz Enzyme Link: | IntEnz 1.14.11.27 |
MEDLINE Enzyme Link: | MEDLINE 1.14.11.27 |
MSA: | |
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Phylogenetic Tree: | |
Uniprot: | |
M-CSA: |
RHEA:42032 | 2 2-oxoglutarate + N(6),N(6)-dimethyl-L-lysine(36)-[histone H3] + 2 O2 = 2 CO2 + 2 formaldehyde + L-lysine(36)-[histone H3] + 2 succinate |
RULE(radius=1) | [*:1]-[N;H0;+0:2](-[CH3;+0:3])-[CH3;+0:4].[*:5]=[C;H0;+0:6](-[OH;+0:7])-[C;H0;+0:8](=[*:9])-[*:10].[*:11]=[C;H0;+0:12](-[OH;+0:13])-[C;H0;+0:14](=[*:15])-[*:16].[O;H0;+0:17]=[O;H0;+0:18].[O;H0;+0:19]=[O;H0;+0:20]>>[*:1]-[NH2;+0:2].[*:9]=[C;H0;+0:8](-[*:10])-[OH;+0:17].[*:15]=[C;H0;+0:14](-[*:16])-[OH;+0:18].[*:5]=[C;H0;+0:6]=[O;H0;+0:7].[*:11]=[C;H0;+0:12]=[O;H0;+0:13].[CH2;+0:3]=[O;H0;+0:19].[CH2;+0:4]=[O;H0;+0:20] |
Reaction | ![]() |
Core-to-Core | No scaffolds atoms were exchanged as a result of the reaction |
Title | Authors | Date | PubMed ID |
---|---|---|---|
Histone demethylation by a family of JmjC domain-containing proteins. | Tsukada Y, Fang J, Erdjument-Bromage H, Warren ME, Borchers CH, Tempst P, Zhang Y | 2006 Feb 16 | 16362057 |