EC Tree |
1. Oxidoreductases |
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen |
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor |
ID: | 1.14.11.42 |
---|---|
Description: | tRNA(Phe) (7-(3-amino-3-carboxypropyl)wyosine(37)-C(2))-hydroxylase. |
Cath: | 1.10.287.3230; 2.60.120.650; |
Click one PDB to see exact 3D structure provided by NGL.
Note: Use your mouse to drag, rotate, and zoom in and out of the structure. Mouse-over to identify atoms and bonds. Mouse controls documentation.UniProtKB Enzyme Link: | UniProtKB 1.14.11.42 |
BRENDA Enzyme Link: | BRENDA 1.14.11.42 |
KEGG Enzyme Link: | KEGG1.14.11.42 |
BioCyc Enzyme Link: | BioCyc 1.14.11.42 |
ExPASy Enzyme Link: | ExPASy1.14.11.42 |
EC2PDB Enzyme Link: | EC2PDB 1.14.11.42 |
ExplorEnz Enzyme Link: | ExplorEnz 1.14.11.42 |
PRIAM enzyme-specific profiles Link: | PRIAM 1.14.11.42 |
IntEnz Enzyme Link: | IntEnz 1.14.11.42 |
MEDLINE Enzyme Link: | MEDLINE 1.14.11.42 |
MSA: | |
---|---|
Phylogenetic Tree: | |
Uniprot: | |
M-CSA: |
RHEA:37899 | 2-oxoglutarate + 7-[(3S)-3-amino-3-carboxypropyl]wyosine(37) in tRNA(Phe) + O2 = 7-(2-hydroxy-3-amino-3-carboxypropyl)wyosine(37) in tRNA(Phe) + CO2 + succinate |
RULE(radius=1) | [*:1]-[CH2;+0:2]-[*:3].[*:4]=[C;H0;+0:5](-[OH;+0:6])-[C;H0;+0:7](=[*:8])-[*:9].[O;H0;+0:10]=[O;H0;+0:11]>>[*:1]-[CH;+0:2](-[*:3])-[OH;+0:10].[*:8]=[C;H0;+0:7](-[*:9])-[OH;+0:11].[*:4]=[C;H0;+0:5]=[O;H0;+0:6] |
Reaction | ![]() |
Core-to-Core | No scaffolds atoms were exchanged as a result of the reaction |
Title | Authors | Date | PubMed ID |
---|---|---|---|
Crystal structure of a novel JmjC-domain-containing protein, TYW5, involved in tRNA modification. | Kato M, Araiso Y, Noma A, Nagao A, Suzuki T, Ishitani R, Nureki O | 2011 Mar | 20972222 |
Expanding role of the jumonji C domain as an RNA hydroxylase. | Noma A, Ishitani R, Kato M, Nagao A, Nureki O, Suzuki T | 2010 Nov 5 | 20739293 |