Enzyme

Download
EC Tree
     1. Oxidoreductases
        1.4 Acting on the CH-NH2 group of donors
            1.4.3 With oxygen as acceptor
ID:1.4.3.3
Description:D-amino-acid oxidase.
Prosite: PDOC00573;
PDB:
PDBScop
Cath: 3.30.9.10; 3.40.50.720; 3.50.50.60;

3D structure

Click one PDB to see exact 3D structure provided by NGL.

Note: Use your mouse to drag, rotate, and zoom in and out of the structure. Mouse-over to identify atoms and bonds. Mouse controls documentation.

References

External Links

UniProtKB Enzyme Link: UniProtKB 1.4.3.3
BRENDA Enzyme Link: BRENDA 1.4.3.3
KEGG Enzyme Link: KEGG1.4.3.3
BioCyc Enzyme Link: BioCyc 1.4.3.3
ExPASy Enzyme Link: ExPASy1.4.3.3
EC2PDB Enzyme Link: EC2PDB 1.4.3.3
ExplorEnz Enzyme Link: ExplorEnz 1.4.3.3
PRIAM enzyme-specific profiles Link: PRIAM 1.4.3.3
IntEnz Enzyme Link: IntEnz 1.4.3.3
MEDLINE Enzyme Link: MEDLINE 1.4.3.3
MSA:

1.4.3.3;

Phylogenetic Tree:

1.4.3.3;

Uniprot:
M-CSA:
RHEA:37583 D-lysine + H2O + O2 = 6-amino-2-oxohexanoate + H2O2 + NH4(+)
RULE(radius=1) [*:1]-[CH;+0:2](-[*:3])-[NH2;+0:4].[O;H0;+0:5]=[O;H0;+0:6].[OH2;+0:7]>>[*:1]-[C;H0;+0:2](-[*:3])=[O;H0;+0:7].[NH3;+0:4].[OH;+0:5]-[OH;+0:6]
Reaction
Core-to-Core No scaffolds atoms were exchanged as a result of the reaction

References

TitleAuthorsDatePubMed ID
Identification of the initial steps in D-lysine catabolism in Pseudomonas putida.Revelles O, Wittich RM, Ramos JL2007 Apr17259313

RHEA:21816 a D-amino acid + H2O + O2 = a 2-oxocarboxylate + H2O2 + NH4(+)
RULE(radius=1) [*:1]-[CH;+0:2](-[*:3])-[NH2;+0:4].[O;H0;+0:5]=[O;H0;+0:6].[OH2;+0:7]>>[*:1]-[C;H0;+0:2](-[*:3])=[O;H0;+0:7].[NH3;+0:4].[OH;+0:5]-[OH;+0:6]
Reaction
Core-to-Core No scaffolds atoms were exchanged as a result of the reaction

References

TitleAuthorsDatePubMed ID
Identification of the histidine residue in D-amino acid oxidase that is covalently modified during inactivation by 5-dimethylaminonaphthalene-1-sulfonyl chloride.Swenson RP, Williams CH Jr, Massey V1983 Jan 106129252
Chemical modification of D-amino acid oxidase. Amino acid sequence of the tryptic peptides containing tyrosine and lysine residues modified by fluorodinitrobenzene.Swenson RP, Williams CH Jr, Massey V1982 Feb 256120171
Crystal structure of human D-amino acid oxidase: context-dependent variability of the backbone conformation of the VAAGL hydrophobic stretch located at the si-face of the flavin ring.Kawazoe T, Tsuge H, Pilone MS, Fukui K2006 Dec17088322
Studies on Phe-228 and Leu-307 recombinant mutants of porcine kidney D-amino acid oxidase: expression, purification, and characterization.Miyano M, Fukui K, Watanabe F, Takahashi S, Tada M, Kanashiro M, Miyake Y1991 Jan1673125
D-AMINO ACID OXIDASE. 3. EFFECT OF PH.DIXON M, KLEPPE K1965 Mar 2214314379
D-AMINO ACID OXIDASE. I. DISSOCIATION AND RECOMBINATION OF THE HOLOENZYME.DIXON M, KLEPPE K1965 Mar 2214314378
The purification and some properties of D-amino acid oxidase.MASSEY V, PALMER G, BENNETT R1961 Mar 1813767909