Enzyme

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     2. Transferases
        2.5 Transferring alkyl or aryl groups, other than methyl groups
            2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
ID:2.5.1.55
Description:3-deoxy-8-phosphooctulonate synthase.
Alternative Name: Phospho-2-keto-3-deoxyoctonate aldolase.
KDOP synthase.
KDO-8-phosphate synthetase.
KDO-8-P synthase.
3-deoxyoctulosonic 8-phosphate synthetase.
3-deoxy-D-mannooctulosonate-8-phosphate synthetase.
3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase.
3-deoxy-D-manno-octulosonate-8-phosphate synthase.
2-keto-3-deoxy-8-phosphooctonic synthetase.
2-dehydro-3-deoxy-phosphooctonate aldolase.
(pyruvate-phosphorylating).
2-dehydro-3-deoxy-D-octonate-8-phosphate D-arabinose-5-phosphate-lyase
Cath: 3.20.20.70;

3D structure

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References

External Links

UniProtKB Enzyme Link: UniProtKB 2.5.1.55
BRENDA Enzyme Link: BRENDA 2.5.1.55
KEGG Enzyme Link: KEGG2.5.1.55
BioCyc Enzyme Link: BioCyc 2.5.1.55
ExPASy Enzyme Link: ExPASy2.5.1.55
EC2PDB Enzyme Link: EC2PDB 2.5.1.55
ExplorEnz Enzyme Link: ExplorEnz 2.5.1.55
PRIAM enzyme-specific profiles Link: PRIAM 2.5.1.55
IntEnz Enzyme Link: IntEnz 2.5.1.55
MEDLINE Enzyme Link: MEDLINE 2.5.1.55
MSA:

2.5.1.55;

Phylogenetic Tree:

2.5.1.55;

Uniprot:
M-CSA:
RHEA:14053 D-arabinose 5-phosphate + H2O + phosphoenolpyruvate = 3-deoxy-alpha-D-manno-2-octulosonate-8-phosphate + phosphate
RULE(radius=1) [*:1]-[C;H0;+0:2](=[CH2;+0:3])-[O;H0;+0:4]-[P;H0;+0:5](=[*:6])(-[*:7])-[*:8].[O;H0;+0:9]=[CH;+0:10]-[*:11]-[*:12]-[OH;+0:13].[OH2;+0:14]>>[*:1]-[C;H0;+0:2]1(-[OH;+0:4])-[CH2;+0:3]-[CH;+0:10](-[OH;+0:9])-[*:11]-[*:12]-[O;H0;+0:13]-1.[*:6]=[P;H0;+0:5](-[*:7])(-[*:8])-[OH;+0:14]
Reaction
Core-to-Core No scaffolds atoms were exchanged as a result of the reaction

References

TitleAuthorsDatePubMed ID
Structural and mechanistic changes along an engineered path from metallo to nonmetallo 3-deoxy-D-manno-octulosonate 8-phosphate synthases.Kona F, Xu X, Martin P, Kuzmic P, Gatti DL2007 Apr 1717381075
Crystal structures of Escherichia coli KDO8P synthase complexes reveal the source of catalytic irreversibility.Vainer R, Belakhov V, Rabkin E, Baasov T, Adir N2005 Aug 1916023668
Functional and biochemical characterization of a recombinant Arabidopsis thaliana 3-deoxy-D-manno-octulosonate 8-phosphate synthase.Wu J, Patel MA, Sundaram AK, Woodard RW2004 Jul 115070398
Renal allograft-infiltrating lymphocytes. A prospective analysis of in vitro growth characteristics and clinical relevance.Kirk AD, Ibrahim MA, Bollinger RR, Dawson DV, Finn OJ1992 Feb1371194
Arabidopsis 3-deoxy-D-manno-oct-2-ulosonate-8-phosphate synthase: cDNA cloning and expression analyses.Matsuura K, Miyagawa I, Kobayashi M, Ohta D, Matoh T2003 Jul12754267
Helicobacter pylori 3-deoxy-D-manno-octulosonate-8-phosphate (KDO-8-P) synthase is a zinc-metalloenzyme.Krosky DJ, Alm R, Berg M, Carmel G, Tummino PJ, Xu B, Yang W2002 Feb 1111904225