Enzyme

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EC Tree
     3. Hydrolases
        3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
            3.5.1 In linear amides
ID:3.5.1.88
Description:Peptide deformylase.
Alternative Name: Polypeptide deformylase.
PDF.
Cath: 3.90.45.10;

3D structure

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References

External Links

UniProtKB Enzyme Link: UniProtKB 3.5.1.88
BRENDA Enzyme Link: BRENDA 3.5.1.88
KEGG Enzyme Link: KEGG3.5.1.88
BioCyc Enzyme Link: BioCyc 3.5.1.88
ExPASy Enzyme Link: ExPASy3.5.1.88
EC2PDB Enzyme Link: EC2PDB 3.5.1.88
ExplorEnz Enzyme Link: ExplorEnz 3.5.1.88
PRIAM enzyme-specific profiles Link: PRIAM 3.5.1.88
IntEnz Enzyme Link: IntEnz 3.5.1.88
MEDLINE Enzyme Link: MEDLINE 3.5.1.88
MSA:

3.5.1.88;

Phylogenetic Tree:

3.5.1.88;

Uniprot:
M-CSA:
RHEA:24420 H2O + N-terminal N-formyl-L-methionyl-[peptide] = formate + N-terminal L-methionyl-[peptide]
RULE(radius=1) [*:1]-[NH;+0:2]-[CH;+0:3]=[*:4].[OH2;+0:5]>>[*:1]-[NH2;+0:2].[*:4]=[CH;+0:3]-[OH;+0:5]
Reaction
Core-to-Core No scaffolds atoms were exchanged as a result of the reaction

References

TitleAuthorsDatePubMed ID
Structure of peptide deformylase and identification of the substrate binding site.Becker A, Schlichting I, Kabsch W, Schultz S, Wagner AF1998 May 89565550
Crystal structure of the Escherichia coli peptide deformylase.Chan MK, Gong W, Rajagopalan PT, Hao B, Tsai CM, Pei D1997 Nov 119374869
Fluid replacement with special reference to burned patients.Bhantooa Dhurmadut1977 Mar 10846875
Zinc is the metal cofactor of Borrelia burgdorferi peptide deformylase.Nguyen KT, Wu JC, Boylan JA, Gherardini FC, Pei D2007 Dec 1517977509