Enzyme

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     4. Lyases
        4.1 Carbon-carbon lyases
            4.1.1 Carboxy-lyases
ID:4.1.1.88
Description:Biotin-independent malonate decarboxylase.
Alternative Name: MDC.
Malonate decarboxylase.
Malonate carboxy-lyase (biotin-independent).
Prosite: PDOC50980;
PDB:
PDBScop
Cath: 1.10.110.40; 1.10.1200.10; 1.10.1470.20; 1.10.287.1960; 1.10.287.3140; 1.20.1050.120; 1.20.5.3540; 3.20.20.70; 3.30.1120.10; 3.30.1120.100;

3D structure

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References

External Links

UniProtKB Enzyme Link: UniProtKB 4.1.1.88
BRENDA Enzyme Link: BRENDA 4.1.1.88
KEGG Enzyme Link: KEGG4.1.1.88
BioCyc Enzyme Link: BioCyc 4.1.1.88
ExPASy Enzyme Link: ExPASy4.1.1.88
EC2PDB Enzyme Link: EC2PDB 4.1.1.88
ExplorEnz Enzyme Link: ExplorEnz 4.1.1.88
PRIAM enzyme-specific profiles Link: PRIAM 4.1.1.88
IntEnz Enzyme Link: IntEnz 4.1.1.88
MEDLINE Enzyme Link: MEDLINE 4.1.1.88
MSA:

4.1.1.88;

Phylogenetic Tree:

4.1.1.88;

Uniprot:
M-CSA:
RHEA:25896 H(+) + malonate = acetate + CO2
RULE(radius=1) [*:1]=[C;H0;+0:2](-[OH;+0:3])-[CH2;+0:4]-[*:5].[H+;H0:6]>>[*:5]-[CH3;+0:4].[*:1]=[C;H0;+0:2]=[O;H0;+0:3]
Reaction
Core-to-Core No scaffolds atoms were exchanged as a result of the reaction

References

TitleAuthorsDatePubMed ID
Malonate decarboxylase of Pseudomonas putida is composed of five subunits.Chohnan S, Fujio T, Takaki T, Yonekura M, Nishihara H, Takamura Y1998 Dec 19851033
Malonate metabolism: biochemistry, molecular biology, physiology, and industrial application.Kim YS2002 Sep 3012359084
Sequence of a gene cluster from Klebsiella pneumoniae encoding malonate decarboxylase and expression of the enzyme in Escherichia coli.Hoenke S, Schmid M, Dimroth P1997 Jun 19208947
Enzymic and genetic basis for bacterial growth on malonate.Dimroth P, Hilbi H1997 Jul11902724
Functional evaluation of the genes involved in malonate decarboxylation by Acinetobacter calcoaceticus.Koo JH, Kim YS1999 Dec10561613
Identification of the active site of phosphoribosyl-dephospho-coenzyme A transferase and relationship of the enzyme to an ancient class of nucleotidyltransferases.Hoenke S, Schmid M, Dimroth P2000 Oct 3111052676
Malonate decarboxylase of Klebsiella pneumoniae catalyses the turnover of acetyl and malonyl thioester residues on a coenzyme-A-like prosthetic group.Schmid M, Berg M, Hilbi H, Dimroth P1996 Apr 18620876
Stereochemical course of biotin-independent malonate decarboxylase catalysis.Handa S, Koo JH, Kim YS, Floss HG1999 Oct 110496981