Enzyme

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     5. Isomerases
        5.4 Intramolecular transferases
            5.4.3 Transferring amino groups
ID:5.4.3.3
Description:Lysine 5,6-aminomutase.
Alternative Name: D-lysine 5,6-aminomutase.
Beta-lysine mutase.
Beta-lysine 5,6-aminomutase.
Adenosylcobalamin-dependent D-lysine 5,6-aminomutase.

3D structure

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References

External Links

UniProtKB Enzyme Link: UniProtKB 5.4.3.3
BRENDA Enzyme Link: BRENDA 5.4.3.3
KEGG Enzyme Link: KEGG5.4.3.3
BioCyc Enzyme Link: BioCyc 5.4.3.3
ExPASy Enzyme Link: ExPASy5.4.3.3
EC2PDB Enzyme Link: EC2PDB 5.4.3.3
ExplorEnz Enzyme Link: ExplorEnz 5.4.3.3
PRIAM enzyme-specific profiles Link: PRIAM 5.4.3.3
IntEnz Enzyme Link: IntEnz 5.4.3.3
MEDLINE Enzyme Link: MEDLINE 5.4.3.3
MSA:

5.4.3.3;

Phylogenetic Tree:

5.4.3.3;

Uniprot:
M-CSA:
RHEA:21736 (3S)-3,6-diaminohexanoate = (3S,5S)-3,5-diaminohexanoate
RULE(radius=1) [*:1]-[CH2;+0:2]-[CH2;+0:3]-[NH2;+0:4]>>[*:1]-[CH;+0:2](-[CH3;+0:3])-[NH2;+0:4]
Reaction
Core-to-Core No scaffolds atoms were exchanged as a result of the reaction

References

TitleAuthorsDatePubMed ID
Pathway of lysine degradation in Fusobacterium nucleatum.Barker HA, Kahn JM, Hedrick L1982 Oct6811551
Large-scale domain motions and pyridoxal-5'-phosphate assisted radical catalysis in coenzyme B12-dependent aminomutases.Maity AN, Chen YH, Ke SC2014 Feb 2024562332
Radical stabilization is crucial in the mechanism of action of lysine 5,6-aminomutase: role of tyrosine-263α as revealed by electron paramagnetic resonance spectroscopy.Chen YH, Maity AN, Pan YC, Frey PA, Ke SC2011 Nov 221939264

RHEA:18241 D-lysine = (2R,5S)-2,5-diaminohexanoate
RULE(radius=1) [*:1]-[CH2;+0:2]-[CH2;+0:3]-[NH2;+0:4]>>[*:1]-[CH;+0:2](-[CH3;+0:3])-[NH2;+0:4]
Reaction
Core-to-Core No scaffolds atoms were exchanged as a result of the reaction

References

TitleAuthorsDatePubMed ID
Radical triplets and suicide inhibition in reactions of 4-thia-D- and 4-thia-L-lysine with lysine 5,6-aminomutase.Tang KH, Mansoorabadi SO, Reed GH, Frey PA2009 Sep 119634897
Identification of a novel pyridoxal 5'-phosphate binding site in adenosylcobalamin-dependent lysine 5,6-aminomutase from Porphyromonas gingivalis.Tang KH, Harms A, Frey PA2002 Jul 912093296