Enzyme

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     4. Lyases
        4.1 Carbon-carbon lyases
            4.1.3 Oxo-acid-lyases
ID:4.1.3.44
Description:tRNA 4-demethylwyosine synthase (AdoMet-dependent).
Cath: 3.20.20.70;

3D structure

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References

External Links

UniProtKB Enzyme Link: UniProtKB 4.1.3.44
BRENDA Enzyme Link: BRENDA 4.1.3.44
KEGG Enzyme Link: KEGG4.1.3.44
BioCyc Enzyme Link: BioCyc 4.1.3.44
ExPASy Enzyme Link: ExPASy4.1.3.44
EC2PDB Enzyme Link: EC2PDB 4.1.3.44
ExplorEnz Enzyme Link: ExplorEnz 4.1.3.44
PRIAM enzyme-specific profiles Link: PRIAM 4.1.3.44
IntEnz Enzyme Link: IntEnz 4.1.3.44
MEDLINE Enzyme Link: MEDLINE 4.1.3.44
MSA:

4.1.3.44;

Phylogenetic Tree:

4.1.3.44;

Uniprot:
M-CSA:
RHEA:36347 N(1)-methylguanosine(37) in tRNA(Phe) + pyruvate + S-adenosyl-L-methionine = 4-demethylwyosine(37) in tRNA(Phe) + 5'-deoxyadenosine + CO2 + H2O + L-methionine
RULE(radius=1) [*:1]-[CH2;+0:2]-[S+;H0:3](-[*:4])-[*:5].[*:6]=[C;H0;+0:7](-[OH;+0:8])-[C;H0;+0:9](-[*:10])=[O;H0;+0:11].[CH3;+0:12]-[*:13]:[*:14]-[NH2;+0:15]>>[*:1]-[CH3;+0:2].[*:4]-[S;H0;+0:3]-[*:5].[*:10]-[c;H0;+0:9]1:[cH;+0:12]:[*:13]:[*:14]:[nH;+0:15]:1.[*:6]=[C;H0;+0:7]=[O;H0;+0:8].[OH2;+0:11]
Reaction
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References

TitleAuthorsDatePubMed ID
4-Demethylwyosine synthase from Pyrococcus abyssi is a radical-S-adenosyl-L-methionine enzyme with an additional [4Fe-4S](+2) cluster that interacts with the pyruvate co-substrate.Perche-Letuvée P, Kathirvelu V, Berggren G, Clemancey M, Latour JM, Maurel V, Douki T, Armengaud J, Mulliez E, Fontecave M, Garcia-Serres R, Gambarelli S, Atta M2012 Nov 3023043105
Pyruvate is the source of the two carbons that are required for formation of the imidazoline ring of 4-demethylwyosine.Young AP, Bandarian V2011 Dec 1322026549